RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 VPS37AQ8NEZ2 397 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 ARHGEF1Q92888 912 aaKnown RBP5.27□□□□□ -1.57
SKP1-202ENST00000353411 ATP8A2Q9NTI2 1148 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 SMARCAL1Q9NZC9 954 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 DCDC2Q9UHG0 476 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 GNPTGQ9UJJ9 305 aa5.27□□□□□ -1.57
SKP1-202ENST00000353411 PVALEFA0A1B0GWK0 134 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 EYA4O95677 639 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 RARAP10276 462 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 RAG1P15918 1043 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 ERFP50548 548 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 GEMIN4P57678 1058 aaKnown RBP5.26□□□□□ -1.57
SKP1-202ENST00000353411 YWHAEP62258 255 aaKnown RBP5.26□□□□□ -1.57
SKP1-202ENST00000353411 CNGA2Q16280 664 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 MTHFSDQ2M296 383 aaKnown RBP5.26□□□□□ -1.57
SKP1-202ENST00000353411 ARMC4Q5T2S8 1044 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 LMBRD2Q68DH5 695 aaPredicted RBP5.26□□□□□ -1.57
SKP1-202ENST00000353411 NEK5Q6P3R8 708 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 TTC39CQ8N584 583 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 PCYOX1LQ8NBM8 494 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 HDAC11Q96DB2 347 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 C15orf38-AP3S2A0A0A6YYH1 394 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 ESYT2A0FGR8 921 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 GTPBP10A4D1E9 387 aaKnown RBP5.26□□□□□ -1.57
SKP1-202ENST00000353411 HTR3EA5X5Y0 456 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 NBNO60934 754 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 USP1O94782 785 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 MYL2P10916 166 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 TOMM20Q15388 145 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 TRADDQ15628 312 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 TYSND1Q2T9J0 566 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 ZC2HC1CQ53FD0 456 aaPredicted RBP5.26□□□□□ -1.57
SKP1-202ENST00000353411 MDH1BQ5I0G3 518 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 RNF19BQ6ZMZ0 732 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 NEK10Q6ZWH5 1172 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 ARPINQ7Z6K5 226 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 GUF1Q8N442 669 aaKnown RBP5.26□□□□□ -1.57
SKP1-202ENST00000353411 FAM13CQ8NE31 585 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 ZSCAN10Q96SZ4 725 aaPredicted RBP5.26□□□□□ -1.57
SKP1-202ENST00000353411 TMEM120AQ9BXJ8 343 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 ARPP21Q9UBL0 812 aaPredicted RBP5.26□□□□□ -1.57
SKP1-202ENST00000353411 RAP1GAPP47736 663 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 FOLH1Q04609 750 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 ANGPT1Q15389 498 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 SPANXN2Q5MJ10 180 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 MEI1Q5TIA1 1274 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 CDKAL1Q5VV42 579 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 EGFLAMQ63HQ2 1017 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 XAGE3Q8WTP9 111 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 HPS3Q969F9 1004 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 E2F7Q96AV8 911 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 GCNAQ96QF7 691 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 GINS4Q9BRT9 223 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 MMTAG2Q9BU76 263 aaKnown RBP5.26□□□□□ -1.57
SKP1-202ENST00000353411 DCLK3Q9C098 648 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 GPCPD1Q9NPB8 672 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 C12orf4Q9NQ89 552 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 C1orf112Q9NSG2 853 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 CAPN6Q9Y6Q1 641 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 GNB5O14775 395 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 ATF4P18848 351 aaPredicted RBP5.26□□□□□ -1.57
SKP1-202ENST00000353411 ATP6V1E1P36543 226 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 PIK3CAP42336 1068 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 ADCY7P51828 1080 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 OXCT1P55809 520 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.26□□□□□ -1.57
SKP1-202ENST00000353411 ZNF394Q53GI3 561 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 NT5DC1Q5TFE4 455 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 ARHGEF19Q8IW93 802 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 C4orf33Q8N1A6 199 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 C19orf60Q96EN9 201 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 OXNAD1Q96HP4 312 aaPredicted RBP5.26□□□□□ -1.57
SKP1-202ENST00000353411 OSBPL11Q9BXB4 747 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 TRIM8Q9BZR9 551 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 SUN2Q9UH99 717 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 GTF3C4Q9UKN8 822 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 BTBD3Q9Y2F9 522 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 MROH7-TTC4A0A0A0MT08 1334 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 GOLGA8JA6NMD2 632 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 GAP43P17677 238 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 SLC1A1P43005 524 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 CPA2P48052 419 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 IREB2P48200 963 aaKnown RBP5.26□□□□□ -1.57
SKP1-202ENST00000353411 NR5A1Q13285 461 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 ORC2Q13416 577 aaPredicted RBP5.26□□□□□ -1.57
SKP1-202ENST00000353411 SH3D19Q5HYK7 790 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 BNC2Q6ZN30 1099 aaPredicted RBP5.26□□□□□ -1.57
SKP1-202ENST00000353411 C4orf50Q6ZRC1 276 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 DEPTORQ8TB45 409 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 NSMCE3Q96MG7 304 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 CLK4Q9HAZ1 481 aaKnown RBP5.26□□□□□ -1.57
SKP1-202ENST00000353411 TUBGCP4Q9UGJ1 667 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 ZNF221Q9UK13 617 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 PCDHA4Q9UN74 947 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 WBP11Q9Y2W2 641 aaKnown RBP5.26□□□□□ -1.57
SKP1-202ENST00000353411 RPS6KL1Q9Y6S9 549 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 ZHX2Q9Y6X8 837 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 ANKARQ7Z5J8 1434 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 ATP10DQ9P241 1426 aa5.26□□□□□ -1.57
SKP1-202ENST00000353411 CCDC195A0A1B0GUA6 201 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms