RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 FAM124BQ9H5Z6 455 aaPredicted RBP19.69■□□□□ 0.74
TRIM41-202ENST00000351937 PCDHGC3Q9UN70 934 aa19.69■□□□□ 0.74
TRIM41-202ENST00000351937 AGAP1Q9UPQ3 857 aa19.69■□□□□ 0.74
TRIM41-202ENST00000351937 MAP9Q49MG5 647 aa19.69■□□□□ 0.74
TRIM41-202ENST00000351937 DCAF12L1Q5VU92 463 aa19.69■□□□□ 0.74
TRIM41-202ENST00000351937 CD101Q93033 1021 aa19.69■□□□□ 0.74
TRIM41-202ENST00000351937 NAP1L3Q99457 506 aaPredicted RBP19.69■□□□□ 0.74
TRIM41-202ENST00000351937 TRIM6Q9C030 488 aaPredicted RBP19.69■□□□□ 0.74
TRIM41-202ENST00000351937 MRPL47Q9HD33 250 aaKnown RBP19.69■□□□□ 0.74
TRIM41-202ENST00000351937 STIM2Q9P246 746 aa19.69■□□□□ 0.74
TRIM41-202ENST00000351937 PAEPP09466 180 aa19.68■□□□□ 0.74
TRIM41-202ENST00000351937 RARBP10826 455 aa19.68■□□□□ 0.74
TRIM41-202ENST00000351937 BRD2P25440 801 aaKnown RBP19.68■□□□□ 0.74
TRIM41-202ENST00000351937 CCNI2Q6ZMN8 369 aaPredicted RBP19.68■□□□□ 0.74
TRIM41-202ENST00000351937 HDAC7Q8WUI4 952 aa19.68■□□□□ 0.74
TRIM41-202ENST00000351937 ALG3Q92685 438 aa19.68■□□□□ 0.74
TRIM41-202ENST00000351937 BTBD6Q96KE9 485 aa19.68■□□□□ 0.74
TRIM41-202ENST00000351937 SNX27Q96L92 541 aa19.68■□□□□ 0.74
TRIM41-202ENST00000351937 DMGDHQ9UI17 866 aaKnown RBP19.68■□□□□ 0.74
TRIM41-202ENST00000351937 ANAPC7Q9UJX3 599 aa19.68■□□□□ 0.74
TRIM41-202ENST00000351937 CCDC66A2RUB6 948 aa19.68■□□□□ 0.74
TRIM41-202ENST00000351937 CCDC188H7C350 402 aa19.68■□□□□ 0.74
TRIM41-202ENST00000351937 TMEM35BQ8NCS4 154 aa19.68■□□□□ 0.74
TRIM41-202ENST00000351937 RNPC3Q96LT9 517 aaKnown RBP19.68■□□□□ 0.74
TRIM41-202ENST00000351937 KRT12Q99456 494 aa19.68■□□□□ 0.74
TRIM41-202ENST00000351937 C11orf70Q9BRQ4 267 aa19.68■□□□□ 0.74
TRIM41-202ENST00000351937 L1RE1Q9UN81 338 aa19.68■□□□□ 0.74
TRIM41-202ENST00000351937 PIN4Q9Y237 131 aaKnown RBP19.68■□□□□ 0.74
TRIM41-202ENST00000351937 KRIT1O00522 736 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 SPOPO43791 374 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 PGK1P00558 417 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 MMP8P22894 467 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 SSTR3P32745 418 aaPredicted RBP19.67■□□□□ 0.74
TRIM41-202ENST00000351937 CTNNA1P35221 906 aaKnown RBP19.67■□□□□ 0.74
TRIM41-202ENST00000351937 PEX5P50542 639 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 PTP4A2Q12974 167 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 GTF2IRD1Q9UHL9 959 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 SCINQ9Y6U3 715 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 MED7O43513 233 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 CTNNA2P26232 953 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 CDH5P33151 784 aaPredicted RBP19.67■□□□□ 0.74
TRIM41-202ENST00000351937 RAP1GAPP47736 663 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 CACNB2Q08289 660 aaPredicted RBP19.67■□□□□ 0.74
TRIM41-202ENST00000351937 PLEKHA7Q6IQ23 1121 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 CXCL17Q6UXB2 119 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 ALKAL1Q6UXT8 129 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 MMS22LQ6ZRQ5 1243 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 TFAP2BQ92481 460 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 KRT35Q92764 455 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 SDCBP2Q9H190 292 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 CEP83Q9Y592 693 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 PCDHA3Q9Y5H8 950 aa19.67■□□□□ 0.74
TRIM41-202ENST00000351937 PCNTO95613 3336 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 MYO1FO00160 1098 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 AOC2O75106 756 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 ZMYND10O75800 440 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 TOMM70O94826 608 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 FGGP02679 453 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 GUCY2FP51841 1108 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 RAD23BP54727 409 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 CDH8P55286 799 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 SP3Q02447 781 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 SMC1AQ14683 1233 aaKnown RBP19.66■□□□□ 0.74
TRIM41-202ENST00000351937 NBPF20Q3BBV1 942 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 TMEM130Q8N3G9 435 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 TTC39CQ8N584 583 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 CELF4Q9BZC1 486 aaKnown RBP19.66■□□□□ 0.74
TRIM41-202ENST00000351937 SMYD3Q9H7B4 428 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 CNTN3Q9P232 1028 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 CITO14578 2027 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 MAP2K7O14733 419 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 POLR3GO15318 223 aaPredicted RBP19.66■□□□□ 0.74
TRIM41-202ENST00000351937 CILPO75339 1184 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 CALB1P05937 261 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 SLC1A1P43005 524 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 SLC7A5Q01650 507 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 MYO1EQ12965 1108 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 MAMLD1Q13495 774 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 ZBTB6Q15916 424 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 HDXQ7Z353 690 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 AP1M1Q9BXS5 423 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 PARVAQ9NVD7 372 aa19.66■□□□□ 0.74
TRIM41-202ENST00000351937 TRIM32Q13049 653 aa19.65■□□□□ 0.74
TRIM41-202ENST00000351937 C2CD6Q53TS8 623 aa19.65■□□□□ 0.74
TRIM41-202ENST00000351937 ZMAT2Q96NC0 199 aaKnown RBP19.65■□□□□ 0.74
TRIM41-202ENST00000351937 TSPAN18Q96SJ8 248 aa19.65■□□□□ 0.74
TRIM41-202ENST00000351937 LHX5Q9H2C1 402 aa19.65■□□□□ 0.74
TRIM41-202ENST00000351937 NXF3Q9H4D5 531 aaKnown RBP19.65■□□□□ 0.74
TRIM41-202ENST00000351937 HES2Q9Y543 173 aa19.65■□□□□ 0.74
TRIM41-202ENST00000351937 DEFB115Q30KQ5 88 aa19.65■□□□□ 0.74
TRIM41-202ENST00000351937 BEST2Q8NFU1 509 aa19.65■□□□□ 0.74
TRIM41-202ENST00000351937 WHAMMQ8TF30 809 aa19.65■□□□□ 0.74
TRIM41-202ENST00000351937 CAPNS2Q96L46 248 aa19.65■□□□□ 0.74
TRIM41-202ENST00000351937 TRIP12Q14669 1992 aaPredicted RBP19.65■□□□□ 0.74
TRIM41-202ENST00000351937 ADAMTS4O75173 837 aa19.64■□□□□ 0.73
TRIM41-202ENST00000351937 CD19P15391 556 aa19.64■□□□□ 0.73
TRIM41-202ENST00000351937 TNFRSF8P28908 595 aa19.64■□□□□ 0.73
TRIM41-202ENST00000351937 PHLDB2Q86SQ0 1253 aa19.64■□□□□ 0.73
TRIM41-202ENST00000351937 RSPH3Q86UC2 560 aa19.64■□□□□ 0.73
TRIM41-202ENST00000351937 KLHL7Q8IXQ5 586 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms