RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 INTUQ9ULD6 942 aa11.02□□□□□ -0.64
SMPD4-201ENST00000351288 SYNPO2Q9UMS6 1093 aa11.02□□□□□ -0.64
SMPD4-201ENST00000351288 PIN4Q9Y237 131 aaKnown RBP11.02□□□□□ -0.64
SMPD4-201ENST00000351288 KAT6AQ92794 2004 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 IQCA1LA6NCM1 817 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 H3BRB1 525 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 PLA2G6O60733 806 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 RNF8O76064 485 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 YBX3P16989 372 aaKnown RBP eCLIP11.02□□□□□ -0.655e-7■□□□□ 9.7
SMPD4-201ENST00000351288 DESP17661 470 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 POLR2BP30876 1174 aaKnown RBP11.02□□□□□ -0.65
SMPD4-201ENST00000351288 HOXA7P31268 230 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-201ENST00000351288 PTGIRP43119 386 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 NAMPTP43490 491 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 CUL2Q13617 745 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 XRRA1Q6P2D8 792 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 PPP1R21Q6ZMI0 780 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 IPO4Q8TEX9 1081 aaKnown RBP11.02□□□□□ -0.65
SMPD4-201ENST00000351288 RUBCNQ92622 972 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 TUT1Q9H6E5 874 aaKnown RBP11.02□□□□□ -0.65
SMPD4-201ENST00000351288 KIAA1586Q9HCI6 787 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 PCDHB2Q9Y5E7 798 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 UBE4BO95155 1302 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 C10orf71Q711Q0 1435 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 ATF2P15336 505 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 COILP38432 576 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-201ENST00000351288 MNAT1P51948 309 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 CDR2Q01850 454 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 ADCY2Q08462 1091 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 TAS1R3Q7RTX0 852 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 ANKS1BQ7Z6G8 1248 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 CCDC89Q8N998 374 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 TMEM35BQ8NCS4 154 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 AP5M1Q9H0R1 490 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 NUB1Q9Y5A7 615 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 HEY1Q9Y5J3 304 aa11.02□□□□□ -0.65
SMPD4-201ENST00000351288 MEFVO15553 781 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-201ENST00000351288 TOM1L1O75674 476 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 SLC25A27O95847 323 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 EDN1P05305 212 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 ZSCAN5DPP0CG00 497 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 AKAP5P24588 427 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 ZC3H18Q86VM9 953 aaKnown RBP11.01□□□□□ -0.65
SMPD4-201ENST00000351288 CCDC125Q86Z20 511 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 RFX6Q8HWS3 928 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 RIOX2Q8IUF8 465 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 SLC9A9Q8IVB4 645 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 LRRN4Q8WUT4 740 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 SHC3Q92529 594 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 MED10Q9BTT4 135 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 HAPLN2Q9GZV7 340 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 RBPJLQ9UBG7 517 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 HESX1Q9UBX0 185 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 ASB14A6NK59 587 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 TNPO2O14787 897 aaKnown RBP11.01□□□□□ -0.65
SMPD4-201ENST00000351288 SLC26A4O43511 780 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 ADCY3O60266 1144 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 FAM107AO95990 144 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 RALAP11233 206 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 ETS1P14921 441 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 FAM102AQ5T9C2 384 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-201ENST00000351288 IER5Q5VY09 327 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 ZNF354CQ86Y25 554 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 CD302Q8IX05 232 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 DNERQ8NFT8 737 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 ELAC2Q9BQ52 826 aaKnown RBP11.01□□□□□ -0.65
SMPD4-201ENST00000351288 JPH2Q9BR39 696 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-201ENST00000351288 GBA2Q9HCG7 927 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-201ENST00000351288 SAE1Q9UBE0 346 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-201ENST00000351288 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.01□□□□□ -0.65
SMPD4-201ENST00000351288 SYNGAP1Q96PV0 1343 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 PASKQ96RG2 1323 aa11.01□□□□□ -0.65
SMPD4-201ENST00000351288 NPTXRO95502 500 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 MXD4Q14582 209 aaPredicted RBP11□□□□□ -0.65
SMPD4-201ENST00000351288 PABPC3Q9H361 631 aaKnown RBP11□□□□□ -0.65
SMPD4-201ENST00000351288 MRPL47Q9HD33 250 aaKnown RBP11□□□□□ -0.65
SMPD4-201ENST00000351288 CISHQ9NSE2 258 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 MAP3K20Q9NYL2 800 aaKnown RBP11□□□□□ -0.65
SMPD4-201ENST00000351288 H7C0C1 242 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 CES2O00748 559 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 OGTO15294 1046 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 GH1P01241 217 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 KRT15P19012 456 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 CA8P35219 290 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 ATP5OP48047 213 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 EFNA5P52803 228 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 TAS2R40P59535 323 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 RPL7AP62424 266 aaKnown RBP11□□□□□ -0.65
SMPD4-201ENST00000351288 BASP1P80723 227 aaKnown RBP11□□□□□ -0.65
SMPD4-201ENST00000351288 ACTN3Q08043 901 aaPredicted RBP11□□□□□ -0.65
SMPD4-201ENST00000351288 MTMR3Q13615 1198 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 KRT81Q14533 505 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 FAM133BQ5BKY9 247 aaKnown RBP11□□□□□ -0.65
SMPD4-201ENST00000351288 TMEM192Q8IY95 271 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 KIAA0319LQ8IZA0 1049 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 GLIS1Q8NBF1 620 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 RSAD2Q8WXG1 361 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 RNF34Q969K3 372 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 SEC16BQ96JE7 1060 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 PRM3Q9NNZ6 103 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms