RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CSGALNACT2Q8N6G5 542 aa23.83■■□□□ 1.41
SNX3-202ENST00000349379 CCDC195A0A1B0GUA6 201 aa23.82■■□□□ 1.4
SNX3-202ENST00000349379 LOC730098B7Z3J9 87 aa23.82■■□□□ 1.4
SNX3-202ENST00000349379 TNFRSF10AO00220 468 aa23.82■■□□□ 1.4
SNX3-202ENST00000349379 MAPK13O15264 365 aa23.82■■□□□ 1.4
SNX3-202ENST00000349379 TNNC2P02585 160 aa23.82■■□□□ 1.4
SNX3-202ENST00000349379 DLATP10515 647 aaKnown RBP23.82■■□□□ 1.4
SNX3-202ENST00000349379 HOXA9P31269 272 aa23.82■■□□□ 1.4
SNX3-202ENST00000349379 PRCPP42785 496 aa23.82■■□□□ 1.4
SNX3-202ENST00000349379 RBP5P82980 135 aa23.82■■□□□ 1.4
SNX3-202ENST00000349379 RTL10Q7L3V2 364 aa23.82■■□□□ 1.4
SNX3-202ENST00000349379 USP37Q86T82 979 aa23.82■■□□□ 1.4
SNX3-202ENST00000349379 PARD3BQ8TEW8 1205 aa23.82■■□□□ 1.4
SNX3-202ENST00000349379 ZNF516Q92618 1163 aa23.82■■□□□ 1.4
SNX3-202ENST00000349379 CCDC127Q96BQ5 260 aa23.82■■□□□ 1.4
SNX3-202ENST00000349379 FNBP1Q96RU3 617 aa23.82■■□□□ 1.4
SNX3-202ENST00000349379 GTPBP4Q9BZE4 634 aaKnown RBP23.82■■□□□ 1.4
SNX3-202ENST00000349379 DSEQ9UL01 958 aa23.82■■□□□ 1.4
SNX3-202ENST00000349379 MYO10Q9HD67 2058 aa23.82■■□□□ 1.4
SNX3-202ENST00000349379 SPDYE4A6NLX3 237 aa23.81■■□□□ 1.4
SNX3-202ENST00000349379 CYB561D2O14569 222 aa23.81■■□□□ 1.4
SNX3-202ENST00000349379 C8AP07357 584 aa23.81■■□□□ 1.4
SNX3-202ENST00000349379 POU2F2P09086 479 aa23.81■■□□□ 1.4
SNX3-202ENST00000349379 UVSSAQ2YD98 709 aa23.81■■□□□ 1.4
SNX3-202ENST00000349379 EDRF1Q3B7T1 1238 aa23.81■■□□□ 1.4
SNX3-202ENST00000349379 LIN9Q5TKA1 542 aa23.81■■□□□ 1.4
SNX3-202ENST00000349379 TPGS2Q68CL5 300 aa23.81■■□□□ 1.4
SNX3-202ENST00000349379 OVOS1Q6IE37 1185 aa23.81■■□□□ 1.4
SNX3-202ENST00000349379 TRAPPC11Q7Z392 1133 aa23.81■■□□□ 1.4
SNX3-202ENST00000349379 PRKD2Q9BZL6 878 aa23.81■■□□□ 1.4
SNX3-202ENST00000349379 GDAP2Q9NXN4 497 aa23.81■■□□□ 1.4
SNX3-202ENST00000349379 MAN1B1Q9UKM7 699 aa23.81■■□□□ 1.4
SNX3-202ENST00000349379 BDP1A6H8Y1 2624 aa23.8■■□□□ 1.4
SNX3-202ENST00000349379 OR6C75A6NL08 312 aa23.8■■□□□ 1.4
SNX3-202ENST00000349379 HNRNPA1P09651 372 aaKnown RBP eCLIP23.8■■□□□ 1.4
SNX3-202ENST00000349379 ATF2P15336 505 aa23.8■■□□□ 1.4
SNX3-202ENST00000349379 TNNI1P19237 187 aa23.8■■□□□ 1.4
SNX3-202ENST00000349379 NR2F2P24468 414 aa23.8■■□□□ 1.4
SNX3-202ENST00000349379 CENPPQ6IPU0 288 aa23.8■■□□□ 1.4
SNX3-202ENST00000349379 RTP3Q9BQQ7 232 aa23.8■■□□□ 1.4
SNX3-202ENST00000349379 TULP1O00294 542 aaPredicted RBP23.79■■□□□ 1.4
SNX3-202ENST00000349379 KRT19P08727 400 aa23.79■■□□□ 1.4
SNX3-202ENST00000349379 MCCD1P59942 119 aaPredicted RBP23.79■■□□□ 1.4
SNX3-202ENST00000349379 TCEAL8Q8IYN2 117 aa23.79■■□□□ 1.4
SNX3-202ENST00000349379 ADSSL1Q8N142 457 aa23.79■■□□□ 1.4
SNX3-202ENST00000349379 SLC7A14Q8TBB6 771 aa23.79■■□□□ 1.4
SNX3-202ENST00000349379 TMC2Q8TDI7 906 aa23.79■■□□□ 1.4
SNX3-202ENST00000349379 SMG7Q92540 1137 aaKnown RBP23.79■■□□□ 1.4
SNX3-202ENST00000349379 AFF4Q9UHB7 1163 aaKnown RBP23.79■■□□□ 1.4
SNX3-202ENST00000349379 MAFFQ9ULX9 164 aa23.79■■□□□ 1.4
SNX3-202ENST00000349379 LRRIQ3A6PVS8 624 aaPredicted RBP23.78■■□□□ 1.4
SNX3-202ENST00000349379 AKAP3O75969 853 aa23.78■■□□□ 1.4
SNX3-202ENST00000349379 VNN2O95498 520 aa23.78■■□□□ 1.4
SNX3-202ENST00000349379 BMP6P22004 513 aa23.78■■□□□ 1.4
SNX3-202ENST00000349379 RPL13P26373 211 aaKnown RBP23.78■■□□□ 1.4
SNX3-202ENST00000349379 ENPEPQ07075 957 aa23.78■■□□□ 1.4
SNX3-202ENST00000349379 BFSP1Q12934 665 aa23.78■■□□□ 1.4
SNX3-202ENST00000349379 PPM1LQ5SGD2 360 aa23.78■■□□□ 1.4
SNX3-202ENST00000349379 WSCD1Q658N2 575 aa23.78■■□□□ 1.4
SNX3-202ENST00000349379 CEP135Q66GS9 1140 aa23.78■■□□□ 1.4
SNX3-202ENST00000349379 CCDC149Q6ZUS6 474 aa23.78■■□□□ 1.4
SNX3-202ENST00000349379 LIMS2Q7Z4I7 341 aa23.78■■□□□ 1.4
SNX3-202ENST00000349379 ZC3H3Q8IXZ2 948 aaKnown RBP23.78■■□□□ 1.4
SNX3-202ENST00000349379 OR10T2Q8NGX3 314 aa23.78■■□□□ 1.4
SNX3-202ENST00000349379 WDR6Q9NNW5 1121 aaKnown RBP23.78■■□□□ 1.4
SNX3-202ENST00000349379 USTQ9Y2C2 406 aa23.78■■□□□ 1.4
SNX3-202ENST00000349379 FRMD4BQ9Y2L6 1034 aa23.78■■□□□ 1.4
SNX3-202ENST00000349379 PTPRDP23468 1912 aa23.77■■□□□ 1.4
SNX3-202ENST00000349379 SEC24AO95486 1093 aa23.77■■□□□ 1.4
SNX3-202ENST00000349379 CST3P01034 146 aaPredicted RBP23.77■■□□□ 1.4
SNX3-202ENST00000349379 C4BPAP04003 597 aaKnown RBP23.77■■□□□ 1.4
SNX3-202ENST00000349379 SSTR3P32745 418 aaPredicted RBP23.77■■□□□ 1.4
SNX3-202ENST00000349379 AP3M2P53677 418 aa23.77■■□□□ 1.4
SNX3-202ENST00000349379 ARPP19P56211 112 aa23.77■■□□□ 1.4
SNX3-202ENST00000349379 GPR17Q13304 367 aa23.77■■□□□ 1.4
SNX3-202ENST00000349379 ADAM9Q13443 819 aa23.77■■□□□ 1.4
SNX3-202ENST00000349379 MORC3Q14149 939 aa23.77■■□□□ 1.4
SNX3-202ENST00000349379 SPATA18Q8TC71 538 aa23.77■■□□□ 1.4
SNX3-202ENST00000349379 HPDLQ96IR7 371 aa23.77■■□□□ 1.4
SNX3-202ENST00000349379 RPGRIP1Q96KN7 1286 aa23.77■■□□□ 1.4
SNX3-202ENST00000349379 L1RE1Q9UN81 338 aa23.77■■□□□ 1.4
SNX3-202ENST00000349379 STAU1O95793 577 aaKnown RBP23.76■■□□□ 1.39
SNX3-202ENST00000349379 OR4Q2P0C623 313 aa23.76■■□□□ 1.39
SNX3-202ENST00000349379 CPB1P15086 417 aa23.76■■□□□ 1.39
SNX3-202ENST00000349379 DLG4P78352 724 aa23.76■■□□□ 1.39
SNX3-202ENST00000349379 MYO1EQ12965 1108 aa23.76■■□□□ 1.39
SNX3-202ENST00000349379 C1orf220Q5T0J3 134 aa23.76■■□□□ 1.39
SNX3-202ENST00000349379 TDRD10Q5VZ19 366 aaKnown RBP23.76■■□□□ 1.39
SNX3-202ENST00000349379 RNF19BQ6ZMZ0 732 aa23.76■■□□□ 1.39
SNX3-202ENST00000349379 METTL23Q86XA0 190 aa23.76■■□□□ 1.39
SNX3-202ENST00000349379 PDCL2Q8N4E4 241 aa23.76■■□□□ 1.39
SNX3-202ENST00000349379 TOP6BLQ8N6T0 577 aa23.76■■□□□ 1.39
SNX3-202ENST00000349379 KHSRPQ92945 711 aaKnown RBP eCLIP23.76■■□□□ 1.39
SNX3-202ENST00000349379 TMEM209Q96SK2 561 aa23.76■■□□□ 1.39
SNX3-202ENST00000349379 MKNK1Q9BUB5 465 aa23.76■■□□□ 1.39
SNX3-202ENST00000349379 NR2E1Q9Y466 385 aa23.76■■□□□ 1.39
SNX3-202ENST00000349379 SNX9Q9Y5X1 595 aa23.76■■□□□ 1.39
SNX3-202ENST00000349379 CLUHO75153 1309 aa23.76■■□□□ 1.39
SNX3-202ENST00000349379 CD44P16070 742 aaKnown RBP23.75■■□□□ 1.39
SNX3-202ENST00000349379 PPP1R2P41236 205 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms