RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 PSMC6P62333 389 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 NFIAQ12857 509 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 LONRF1Q17RB8 773 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 CENPPQ6IPU0 288 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 ZNF557Q8N988 423 aaPredicted RBP11.44□□□□□ -0.58
CLCN6-202ENST00000346436 ZBTB18Q99592 522 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 TNS2Q63HR2 1409 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 COL5A2P05997 1499 aaPredicted RBP11.44□□□□□ -0.58
CLCN6-202ENST00000346436 IRF1P10914 325 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 CHN1P15882 459 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 WDR59Q6PJI9 974 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 PNMA5Q96PV4 448 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 RIT2Q99578 217 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 SYT17Q9BSW7 474 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 INTUQ9ULD6 942 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 ARHGAP23Q9P227 1491 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 ADM5C9JUS6 153 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 PODXLO00592 558 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 SPAG7O75391 227 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 BAG2O95816 211 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 ACADSBP45954 432 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 NOP14P78316 857 aaKnown RBP11.44□□□□□ -0.58
CLCN6-202ENST00000346436 TMEM62Q0P6H9 643 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 RCN2Q14257 317 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 TSNAXIP1Q2TAA8 658 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 BBS9Q3SYG4 887 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 TAF1BQ53T94 588 aaPredicted RBP11.44□□□□□ -0.58
CLCN6-202ENST00000346436 PPM1LQ5SGD2 360 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 KRT39Q6A163 491 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 TMEM270Q6UE05 265 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 KCNV2Q8TDN2 545 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 TEKT4Q8WW24 435 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 ULK4Q96C45 1275 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 RBM41Q96IZ5 413 aaKnown RBP11.44□□□□□ -0.58
CLCN6-202ENST00000346436 BTBD6Q96KE9 485 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 CDK5RAP1Q96SZ6 601 aaKnown RBP11.44□□□□□ -0.58
CLCN6-202ENST00000346436 RTFDC1Q9BY42 306 aaPredicted RBP11.44□□□□□ -0.58
CLCN6-202ENST00000346436 SIK2Q9H0K1 926 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 SNX9Q9Y5X1 595 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.44□□□□□ -0.58
CLCN6-202ENST00000346436 AP3B1O00203 1094 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 PPFIA2O75334 1257 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 GCKP35557 465 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 SEMA3FQ13275 785 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 MTM1Q13496 603 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 CDC26Q8NHZ8 85 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 LZICQ8WZA0 190 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 ELMO3Q96BJ8 720 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 SPATC1LQ9H0A9 340 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 MAP10Q9P2G4 905 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 H0Y3Z8 333 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 CORO7P57737 925 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 TAP1Q03518 808 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 CDH18Q13634 790 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 PSMD6Q15008 389 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 NBPF12Q5TAG4 269 aaPredicted RBP11.44□□□□□ -0.58
CLCN6-202ENST00000346436 TRIM59Q8IWR1 403 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 XPO6Q96QU8 1125 aaKnown RBP11.44□□□□□ -0.58
CLCN6-202ENST00000346436 OSGEPQ9NPF4 335 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 POLLQ9UGP5 575 aa11.44□□□□□ -0.58
CLCN6-202ENST00000346436 RASA4BC9J798 803 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 TXNDC9O14530 226 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 RASA4O43374 803 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 PON1P27169 355 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 MAP4P27816 1152 aaKnown RBP11.43□□□□□ -0.58
CLCN6-202ENST00000346436 NLRP11P59045 1033 aaKnown RBP11.43□□□□□ -0.58
CLCN6-202ENST00000346436 ATF7IP2Q5U623 682 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 HSPH1Q92598 858 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 GPRC5DQ9NZD1 345 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 APEX2Q9UBZ4 518 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 NAGPAQ9UK23 515 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 USH1CQ9Y6N9 552 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 MIF4GDA9UHW6 222 aaKnown RBP11.43□□□□□ -0.58
CLCN6-202ENST00000346436 CREB3O43889 395 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 TCF7P36402 384 aaPredicted RBP11.43□□□□□ -0.58
CLCN6-202ENST00000346436 PRKCEQ02156 737 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 SYCP2LQ5T4T6 812 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 ZNF571Q7Z3V5 609 aaPredicted RBP11.43□□□□□ -0.58
CLCN6-202ENST00000346436 FIBCD1Q8N539 461 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 SLAIN1Q8ND83 568 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 DNERQ8NFT8 737 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 THAP2Q9H0W7 228 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 HACD3Q9P035 362 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 FER1L4A9Z1Z3 1794 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 FMN2Q9NZ56 1722 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 ARHGAP42A6NI28 874 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 MAP2K7O14733 419 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 NPM3O75607 178 aaKnown RBP11.43□□□□□ -0.58
CLCN6-202ENST00000346436 MBL2P11226 248 aaPredicted RBP11.43□□□□□ -0.58
CLCN6-202ENST00000346436 NDUFV1P49821 464 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 CACNB2Q08289 660 aaPredicted RBP11.43□□□□□ -0.58
CLCN6-202ENST00000346436 NME3Q13232 169 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 TSEN2Q8NCE0 465 aaKnown RBP11.43□□□□□ -0.58
CLCN6-202ENST00000346436 CYP26B1Q9NR63 512 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 KLC4Q9NSK0 619 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 SLC15A5A6NIM6 579 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 IRX4P78413 519 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 PPIGQ13427 754 aaKnown RBP eCLIP11.43□□□□□ -0.583e-7■■■□□ 15.8
CLCN6-202ENST00000346436 SMAD1Q15797 465 aaKnown RBP11.43□□□□□ -0.58
CLCN6-202ENST00000346436 NFE2Q16621 373 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms