RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 XPO6Q96QU8 1125 aaKnown RBP16.39■□□□□ 0.21
UPF3B-202ENST00000345865 FAM129AQ9BZQ8 928 aa16.39■□□□□ 0.21
UPF3B-202ENST00000345865 CNOT10Q9H9A5 744 aaKnown RBP16.39■□□□□ 0.21
UPF3B-202ENST00000345865 CISHQ9NSE2 258 aa16.39■□□□□ 0.21
UPF3B-202ENST00000345865 PARVAQ9NVD7 372 aa16.39■□□□□ 0.21
UPF3B-202ENST00000345865 ANK1P16157 1881 aa16.39■□□□□ 0.21
UPF3B-202ENST00000345865 PI4K2BG5E9Z4 385 aa16.39■□□□□ 0.21
UPF3B-202ENST00000345865 RASGRF2O14827 1237 aa16.39■□□□□ 0.21
UPF3B-202ENST00000345865 B4GALT5O43286 388 aa16.39■□□□□ 0.21
UPF3B-202ENST00000345865 ITGBL1O95965 494 aaPredicted RBP16.39■□□□□ 0.21
UPF3B-202ENST00000345865 SSR1P43307 286 aaKnown RBP16.39■□□□□ 0.21
UPF3B-202ENST00000345865 MCL1Q07820 350 aa16.39■□□□□ 0.21
UPF3B-202ENST00000345865 PLCB4Q15147 1175 aa16.39■□□□□ 0.21
UPF3B-202ENST00000345865 LONRF1Q17RB8 773 aa16.39■□□□□ 0.21
UPF3B-202ENST00000345865 CELF3Q5SZQ8 465 aaKnown RBP16.39■□□□□ 0.21
UPF3B-202ENST00000345865 ATXN2LQ8WWM7 1075 aaKnown RBP16.39■□□□□ 0.21
UPF3B-202ENST00000345865 PPM1EQ8WY54 764 aa16.39■□□□□ 0.21
UPF3B-202ENST00000345865 IMPG2Q9BZV3 1241 aa16.39■□□□□ 0.21
UPF3B-202ENST00000345865 SCINQ9Y6U3 715 aa16.39■□□□□ 0.21
UPF3B-202ENST00000345865 ATXN2Q99700 1313 aaKnown RBP16.38■□□□□ 0.21
UPF3B-202ENST00000345865 EVPLQ92817 2033 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 C5orf60A6NFR6 353 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 F8VP50 259 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 LGR5O75473 907 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 KRT10P13645 584 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 OSTNP61366 133 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 GRM1Q13255 1194 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 CCNG2Q16589 344 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 MAPK6Q16659 721 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 CCDC38Q502W7 563 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 TXNRD3NBQ6F5E7 133 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 SCARA5Q6ZMJ2 495 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 TRMT10CQ7L0Y3 403 aaKnown RBP16.38■□□□□ 0.21
UPF3B-202ENST00000345865 RHPN2Q8IUC4 686 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 FBXO16Q8IX29 292 aaPredicted RBP16.38■□□□□ 0.21
UPF3B-202ENST00000345865 EXD1Q8NHP7 514 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 SELENOSQ9BQE4 189 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 XYLT2Q9H1B5 865 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 PTPRHQ9HD43 1115 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 RBPJLQ9UBG7 517 aa16.38■□□□□ 0.21
UPF3B-202ENST00000345865 AGTP01019 485 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 POTEJP0CG39 1038 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 PROZP22891 400 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 ADCY8P40145 1251 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 TFAMQ00059 246 aaKnown RBP16.37■□□□□ 0.21
UPF3B-202ENST00000345865 IFT88Q13099 833 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 DUOXA2Q1HG44 320 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 EEF1DP3Q658K8 133 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 SYDE1Q6ZW31 735 aaPredicted RBP16.37■□□□□ 0.21
UPF3B-202ENST00000345865 TMEM192Q8IY95 271 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 THNSL1Q8IYQ7 743 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 MICALL1Q8N3F8 863 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 GLIS1Q8NBF1 620 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 CENPTQ96BT3 561 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 FAM167AQ96KS9 214 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 NIF3L1Q9GZT8 377 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 MINDY3Q9H8M7 445 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 SBF1O95248 1867 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 GAS8O95995 478 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 IQCF3P0C7M6 154 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 DRD4P21917 467 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 MAN1A1P33908 653 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 ASPAP45381 313 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 AP3M2P53677 418 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 NFX1Q12986 1120 aaKnown RBP16.37■□□□□ 0.21
UPF3B-202ENST00000345865 MXD4Q14582 209 aaPredicted RBP16.37■□□□□ 0.21
UPF3B-202ENST00000345865 KYNUQ16719 465 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 GPAT2Q6NUI2 795 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 SPATS2Q86XZ4 545 aaKnown RBP16.37■□□□□ 0.21
UPF3B-202ENST00000345865 GRK7Q8WTQ7 553 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 KAT2BQ92831 832 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 MCEEQ96PE7 176 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 ZNF317Q96PQ6 595 aaPredicted RBP16.37■□□□□ 0.21
UPF3B-202ENST00000345865 JPH2Q9BR39 696 aaPredicted RBP16.37■□□□□ 0.21
UPF3B-202ENST00000345865 IP6K2Q9UHH9 426 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 IVNS1ABPQ9Y6Y0 642 aa16.37■□□□□ 0.21
UPF3B-202ENST00000345865 FOXO6A8MYZ6 492 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 CPP00450 1065 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 ATF2P15336 505 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 CREB1P16220 341 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 SGSM1Q2NKQ1 1148 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 MFSD5Q6N075 450 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 MFSD7Q6UXD7 560 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 EXOC3L1Q86VI1 746 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 ACSF2Q96CM8 615 aaPredicted RBP16.36■□□□□ 0.21
UPF3B-202ENST00000345865 NLRP4Q96MN2 994 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 SCLT1Q96NL6 688 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 TRAIPQ9BWF2 469 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 TMEM51Q9NW97 253 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 ANAPC5Q9UJX4 755 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 DNAJC25-GNG10A0A024R161 153 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 NOP56O00567 594 aaKnown RBP16.36■□□□□ 0.21
UPF3B-202ENST00000345865 TTC4O95801 387 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 KLRC2P26717 231 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 PPP1R15BQ5SWA1 713 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 CYP4A22Q5TCH4 519 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 KAZNQ674X7 775 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 CCDC62Q6P9F0 684 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 TSHZ1Q6ZSZ6 1077 aa16.36■□□□□ 0.21
UPF3B-202ENST00000345865 PLPPR4Q7Z2D5 763 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms