RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 FAM192AQ9GZU8 254 aa18.27■□□□□ 0.52
SPAST-202ENST00000345662 CHORDC1Q9UHD1 332 aaPredicted RBP18.27■□□□□ 0.52
SPAST-202ENST00000345662 CST8O60676 142 aa18.27■□□□□ 0.52
SPAST-202ENST00000345662 RBP3P10745 1247 aa18.27■□□□□ 0.52
SPAST-202ENST00000345662 SARSP49591 514 aaKnown RBP18.27■□□□□ 0.52
SPAST-202ENST00000345662 MRPL28Q13084 256 aaKnown RBP18.27■□□□□ 0.52
SPAST-202ENST00000345662 SPATA18Q8TC71 538 aa18.27■□□□□ 0.52
SPAST-202ENST00000345662 CNDP1Q96KN2 507 aa18.27■□□□□ 0.52
SPAST-202ENST00000345662 TMEM120AQ9BXJ8 343 aa18.27■□□□□ 0.52
SPAST-202ENST00000345662 TLR10Q9BXR5 811 aa18.27■□□□□ 0.52
SPAST-202ENST00000345662 GABBR1Q9UBS5 961 aa18.27■□□□□ 0.52
SPAST-202ENST00000345662 F5H6K3 240 aa18.27■□□□□ 0.51
SPAST-202ENST00000345662 CES2O00748 559 aa18.27■□□□□ 0.51
SPAST-202ENST00000345662 WDR47O94967 919 aa18.27■□□□□ 0.51
SPAST-202ENST00000345662 KCNA2P16389 499 aa18.27■□□□□ 0.51
SPAST-202ENST00000345662 KLRC3Q07444 240 aa18.27■□□□□ 0.51
SPAST-202ENST00000345662 ST3GAL1Q11201 340 aa18.27■□□□□ 0.51
SPAST-202ENST00000345662 CCDC85BQ15834 202 aaPredicted RBP18.27■□□□□ 0.51
SPAST-202ENST00000345662 SNX19Q92543 992 aa18.27■□□□□ 0.51
SPAST-202ENST00000345662 FAM167AQ96KS9 214 aa18.27■□□□□ 0.51
SPAST-202ENST00000345662 RUBCNLQ9H714 662 aa18.27■□□□□ 0.51
SPAST-202ENST00000345662 A8MXQ7 604 aa18.27■□□□□ 0.51
SPAST-202ENST00000345662 GFAPP14136 432 aa18.27■□□□□ 0.51
SPAST-202ENST00000345662 RFX5P48382 616 aaPredicted RBP18.27■□□□□ 0.51
SPAST-202ENST00000345662 RAP1GDS1P52306 607 aa18.27■□□□□ 0.51
SPAST-202ENST00000345662 EFHC1Q5JVL4 640 aa18.27■□□□□ 0.51
SPAST-202ENST00000345662 ZNF677Q86XU0 584 aa18.27■□□□□ 0.51
SPAST-202ENST00000345662 SULF1Q8IWU6 871 aa18.27■□□□□ 0.51
SPAST-202ENST00000345662 OR6P1Q8NGX9 317 aa18.27■□□□□ 0.51
SPAST-202ENST00000345662 NSUN4Q96CB9 384 aaKnown RBP18.27■□□□□ 0.51
SPAST-202ENST00000345662 HNRNPCL2B2RXH8 293 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 NFX1Q12986 1120 aaKnown RBP18.26■□□□□ 0.51
SPAST-202ENST00000345662 MROH9Q5TGP6 573 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 PGM2Q96G03 612 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 PAWRQ96IZ0 340 aaKnown RBP18.26■□□□□ 0.51
SPAST-202ENST00000345662 FAM84BQ96KN1 310 aaPredicted RBP18.26■□□□□ 0.51
SPAST-202ENST00000345662 PPP1R16BQ96T49 567 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 VPS33BQ9H267 617 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 CDC42BPGQ6DT37 1551 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 RIPK2O43353 540 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 ZC2HC1CQ53FD0 456 aaPredicted RBP18.26■□□□□ 0.51
SPAST-202ENST00000345662 ATG4AQ8WYN0 398 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 TRAPPC9Q96Q05 1148 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 ADGRA3Q8IWK6 1321 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 TMEM247A6NEH6 219 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 AP3B1O00203 1094 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 RPS6P62753 249 aaKnown RBP18.26■□□□□ 0.51
SPAST-202ENST00000345662 USP10Q14694 798 aaKnown RBP18.26■□□□□ 0.51
SPAST-202ENST00000345662 OASLQ15646 514 aaKnown RBP18.26■□□□□ 0.51
SPAST-202ENST00000345662 TRIM60Q495X7 471 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 AASDHQ4L235 1098 aaPredicted RBP18.26■□□□□ 0.51
SPAST-202ENST00000345662 LRRC6Q86X45 466 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 ATP8B4Q8TF62 1192 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 CNKSR1Q969H4 720 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 OLA1Q9NTK5 396 aaKnown RBP18.26■□□□□ 0.51
SPAST-202ENST00000345662 NBPF26B4DH59 902 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 TULP2O00295 520 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 CENPPQ6IPU0 288 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 NBPF15Q8N660 670 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 MPP4Q96JB8 637 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 SEMA6BQ9H3T3 888 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 RSAD1Q9HA92 442 aa18.26■□□□□ 0.51
SPAST-202ENST00000345662 THRAP10827 490 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 IFNA8P32881 189 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 IYDQ6PHW0 289 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 CASP10Q92851 521 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 IFT43Q96FT9 208 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 BTBD10Q9BSF8 475 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 MRPL4Q9BYD3 311 aaKnown RBP18.25■□□□□ 0.51
SPAST-202ENST00000345662 RFC5P40937 340 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 CLK1P49759 484 aaKnown RBP18.25■□□□□ 0.51
SPAST-202ENST00000345662 SERPINB8P50452 374 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 LRRC74BQ6ZQY2 392 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 GIMAP4Q9NUV9 329 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 SLC24A2Q9UI40 661 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 UBE2Q2LH0YL09 131 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 ALBP02768 609 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 HLA-DPA1P20036 260 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 VCPP55072 806 aaKnown RBP18.25■□□□□ 0.51
SPAST-202ENST00000345662 EEPD1Q7L9B9 569 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 TATDN2Q93075 761 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 FEM1BQ9UK73 627 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 SETBP1Q9Y6X0 1596 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 PSTPIP1O43586 416 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 AKR1B1P15121 316 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 PDGFRAP16234 1089 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 EAPPQ56P03 285 aaPredicted RBP18.25■□□□□ 0.51
SPAST-202ENST00000345662 ZC3H12BQ5HYM0 836 aaKnown RBP18.25■□□□□ 0.51
SPAST-202ENST00000345662 SWSAP1Q6NVH7 229 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 TMPRSS6Q8IU80 811 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 CD302Q8IX05 232 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 TERB1Q8NA31 727 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 C1orf131Q8NDD1 294 aaKnown RBP18.25■□□□□ 0.51
SPAST-202ENST00000345662 FEZF2Q8TBJ5 459 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 INPP5DQ92835 1189 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 AGXT2Q9BYV1 514 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 CD209Q9NNX6 404 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 NAALADL1Q9UQQ1 740 aa18.25■□□□□ 0.51
SPAST-202ENST00000345662 ABCA6Q8N139 1617 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 ATP4AP20648 1035 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms