RNA–Protein interactions for RNA: ENST00000345094.7

THUMPD3-201, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene THUMPD3, Length 3,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-201ENST00000345094 NKX1-2Q9UD57 310 aaPredicted RBP11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 CASZ1Q86V15 1759 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 CCDC78A2IDD5 438 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 C5orf60A6NFR6 353 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 ATP6V1B1P15313 513 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 RFX1P22670 979 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 FOXN2P32314 431 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 HOXD13P35453 343 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 NT5C2P49902 561 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 PSMC1P62191 440 aaKnown RBP11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 BNIP1Q12981 228 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 WLSQ5T9L3 541 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 MFSD7Q6UXD7 560 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 CRELD2Q6UXH1 353 aaPredicted RBP11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 EMC1Q8N766 993 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 POU5F2Q8N7G0 328 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 C7orf31Q8N865 590 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 ZNF75CPQ92670 426 aaPredicted RBP11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 FAM81BQ96LP2 452 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 ZNF570Q96NI8 536 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 WDR18Q9BV38 432 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 DCLRE1BQ9H816 532 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 RAB6BQ9NRW1 208 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 PACSIN3Q9UKS6 424 aa11.25□□□□□ -0.61
THUMPD3-201ENST00000345094 BTNL10A8MVZ5 291 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 MEI4A8MW99 385 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 STAMBPO95630 424 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 ZBED1O96006 694 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 ETS2P15036 469 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 TAC1P20366 129 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 POLD1P28340 1107 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 POLR2BP30876 1174 aaKnown RBP11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 PTGIRP43119 386 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 CACNA2D1P54289 1103 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 EIF3EP60228 445 aaKnown RBP11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 DEUP1Q05D60 604 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 EFTUD2Q15029 972 aaKnown RBP eCLIP11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 SLC27A3Q5K4L6 730 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 MIS18BP1Q6P0N0 1132 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 PRPF39Q86UA1 669 aaKnown RBP11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 GPD1LQ8N335 351 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 EFCAB3Q8N7B9 438 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 ETNPPLQ8TBG4 499 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 ATP2A3Q93084 1043 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 PAFAH2Q99487 392 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 VCX3AQ9NNX9 186 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 NWD2Q9ULI1 1742 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 MYO5AQ9Y4I1 1855 aaKnown RBP11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 SRRM3A6NNA2 597 aaPredicted RBP11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 KRT37O76014 449 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 ADRB2P07550 413 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 GTF2H1P32780 548 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 ARL1P40616 181 aaPredicted RBP11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 FMO1Q01740 532 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 SLFN11Q7Z7L1 901 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 PCGF5Q86SE9 256 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 PAF1Q8N7H5 531 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 SLC7A3Q8WY07 619 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 TMEM120AQ9BXJ8 343 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 KIAA1586Q9HCI6 787 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 AGO2Q9UKV8 859 aaKnown RBP11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 STXBP5LQ9Y2K9 1186 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 PCDHB2Q9Y5E7 798 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 TRIM49D1C9J1S8 452 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 CSDE1O75534 798 aaKnown RBP11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 RBP3P10745 1247 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 PYGBP11216 843 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 GZMAP12544 262 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 ALDH1B1P30837 517 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 MARSP56192 900 aaKnown RBP11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 MPP2Q14168 576 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 TRIP10Q15642 601 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 IZUMO2Q6UXV1 221 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 ZCCHC23Q6ZST2 131 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 ST13P4Q8IZP2 240 aaPredicted RBP11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 NME8Q8N427 588 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 TMEM35BQ8NCS4 154 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 CCNYQ8ND76 341 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 SEMA4DQ92854 862 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 VPS11Q9H270 941 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 TMEM8AQ9HCN3 771 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 PIH1D1Q9NWS0 290 aaKnown RBP11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 NYAP2Q9P242 653 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 PCDHA2Q9Y5H9 948 aa11.24□□□□□ -0.61
THUMPD3-201ENST00000345094 H0YIN7 160 aa11.23□□□□□ -0.61
THUMPD3-201ENST00000345094 NOP56O00567 594 aaKnown RBP11.23□□□□□ -0.61
THUMPD3-201ENST00000345094 PTPN4P29074 926 aa11.23□□□□□ -0.61
THUMPD3-201ENST00000345094 PEX5P50542 639 aa11.23□□□□□ -0.61
THUMPD3-201ENST00000345094 CDH6P55285 790 aa11.23□□□□□ -0.61
THUMPD3-201ENST00000345094 SLC1A5Q15758 541 aa11.23□□□□□ -0.61
THUMPD3-201ENST00000345094 VSTM1Q6UX27 236 aa11.23□□□□□ -0.61
THUMPD3-201ENST00000345094 DEPDC1BQ8WUY9 529 aa11.23□□□□□ -0.61
THUMPD3-201ENST00000345094 ATP6V0A1Q93050 837 aa11.23□□□□□ -0.61
THUMPD3-201ENST00000345094 SENP7Q9BQF6 1050 aa11.23□□□□□ -0.61
THUMPD3-201ENST00000345094 RANBP17Q9H2T7 1088 aaKnown RBP11.23□□□□□ -0.61
THUMPD3-201ENST00000345094 PARVAQ9NVD7 372 aa11.23□□□□□ -0.61
THUMPD3-201ENST00000345094 CYP39A1Q9NYL5 469 aa11.23□□□□□ -0.61
THUMPD3-201ENST00000345094 IP6K2Q9UHH9 426 aa11.23□□□□□ -0.61
THUMPD3-201ENST00000345094 MYH7BA7E2Y1 1941 aa11.23□□□□□ -0.61
THUMPD3-201ENST00000345094 JAM2P57087 298 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms