RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 TMC4Q7Z404 712 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 CRELD1Q96HD1 420 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 ACAD9Q9H845 621 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 DNAJC12Q9UKB3 198 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 PRMT3O60678 531 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 CBFA2T3O75081 653 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 NPY2RP49146 381 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 KCNN4O15554 427 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 RESTQ13127 1097 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 COPS7BQ9H9Q2 264 aaPredicted RBP18.38■□□□□ 0.53
SMAD4-201ENST00000342988 MAGEA13PA6NCF6 341 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 IDH3BO43837 385 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 PAICSP22234 425 aaKnown RBP18.37■□□□□ 0.53
SMAD4-201ENST00000342988 IREB2P48200 963 aaKnown RBP18.37■□□□□ 0.53
SMAD4-201ENST00000342988 CROCCP3Q8IVE0 287 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 PSMC3IPQ9P2W1 217 aaPredicted RBP18.37■□□□□ 0.53
SMAD4-201ENST00000342988 AIM2O14862 343 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 ERVK-10P10266 1014 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 TNIP3Q96KP6 325 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 LIMA1Q9UHB6 759 aaKnown RBP18.37■□□□□ 0.53
SMAD4-201ENST00000342988 EFCAB10A6NFE3 127 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 USP17L12C9JPN9 530 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 USP17L21D6R901 530 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 BCL10O95999 233 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 NT5C2P49902 561 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 TMEM270Q6UE05 265 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 IFNL3Q8IZI9 196 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 VTI1BQ9UEU0 232 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 ANAPC2Q9UJX6 822 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 CHRNB3Q05901 458 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 C8orf58Q8NAV2 365 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 POLR1DQ9Y2S0 133 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 EPB42P16452 691 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 TYW3Q6IPR3 259 aaKnown RBP18.37■□□□□ 0.53
SMAD4-201ENST00000342988 RGS12O14924 1447 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 MGRN1O60291 552 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 TAF5LO75529 589 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 APRTP07741 180 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 SLC1A1P43005 524 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.37■□□□□ 0.53
SMAD4-201ENST00000342988 C11orf96Q7Z7L8 435 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 OSBPL8Q9BZF1 889 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 ARHGAP31Q2M1Z3 1444 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 TSPOAP1O95153 1857 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 ATP6V1B1P15313 513 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 GRK4P32298 578 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 RBBP4Q09028 425 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 CATSPER2Q96P56 530 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 CXorf56Q9H5V9 222 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 MLXIPLQ9NP71 852 aa18.37■□□□□ 0.53
SMAD4-201ENST00000342988 ATP5JP18859 108 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 BTBD8Q5XKL5 378 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 SLC9A6Q92581 669 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 IL17RAQ96F46 866 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 TRABDQ9H4I3 376 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 SPTLC3Q9NUV7 552 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 TNKSO95271 1327 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 FAM47DPA6NHR8 397 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 SCGNO76038 276 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 MPOP05164 745 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 SKP1P63208 163 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 SLC27A3Q5K4L6 730 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 MUC3BQ9H195 1237 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 KLHL11Q9NVR0 708 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 UBE2QL1A1L167 161 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 SNX17Q15036 470 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 SPON2Q9BUD6 331 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 INSRP06213 1382 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 NOS1P29475 1434 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 GTF2IP78347 998 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 ZNF827Q17R98 1081 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 FAM83EQ2M2I3 478 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 ASB14A6NK59 587 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 TWF1Q12792 350 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 TASP1Q9H6P5 420 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 ABI2Q9NYB9 513 aaPredicted RBP18.36■□□□□ 0.53
SMAD4-201ENST00000342988 CHD4Q14839 1912 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 ARHGEF11O15085 1522 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 COPAP53621 1224 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 KPNA5O15131 536 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 ZRANB3Q5FWF4 1079 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 LINC00523Q86TU6 105 aa18.36■□□□□ 0.53
SMAD4-201ENST00000342988 ALG11Q2TAA5 492 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 MSANTD1Q6ZTZ1 278 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 TAF13Q15543 124 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 EEF2KMTQ96G04 330 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 PHF11Q9UIL8 331 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 CYP2D7A0A087X1C5 515 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 LOC102724159A0A0B4J2E5 919 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 AP3M2P53677 418 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 CYP27A1Q02318 531 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 PWP2Q15269 919 aaKnown RBP18.35■□□□□ 0.53
SMAD4-201ENST00000342988 C11orf74Q86VG3 221 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 SAMD3Q8N6K7 520 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 CBX5P45973 191 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 MCCD1P59942 119 aaPredicted RBP18.35■□□□□ 0.53
SMAD4-201ENST00000342988 C4orf22Q6V702 233 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 TMEM63CQ9P1W3 806 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 MAGI1Q96QZ7 1491 aaPredicted RBP18.35■□□□□ 0.53
SMAD4-201ENST00000342988 THUMPD3Q9BV44 507 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms