RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 TNNC1P63316 161 aa21.29■■□□□ 1
RTN1-202ENST00000342503 RBP5P82980 135 aa21.29■■□□□ 1
RTN1-202ENST00000342503 CAP1Q01518 475 aa21.29■■□□□ 1
RTN1-202ENST00000342503 PTP4A2Q12974 167 aa21.29■■□□□ 1
RTN1-202ENST00000342503 CCNI2Q6ZMN8 369 aaPredicted RBP21.29■■□□□ 1
RTN1-202ENST00000342503 MMS22LQ6ZRQ5 1243 aa21.29■■□□□ 1
RTN1-202ENST00000342503 TFAP2BQ92481 460 aa21.29■■□□□ 1
RTN1-202ENST00000342503 CD101Q93033 1021 aa21.29■■□□□ 1
RTN1-202ENST00000342503 SNX27Q96L92 541 aa21.29■■□□□ 1
RTN1-202ENST00000342503 FUT8Q9BYC5 575 aa21.29■■□□□ 1
RTN1-202ENST00000342503 WNT8AQ9H1J5 351 aa21.29■■□□□ 1
RTN1-202ENST00000342503 PLEKHA5Q9HAU0 1116 aa21.29■■□□□ 1
RTN1-202ENST00000342503 ANAPC7Q9UJX3 599 aa21.29■■□□□ 1
RTN1-202ENST00000342503 HES2Q9Y543 173 aa21.29■■□□□ 1
RTN1-202ENST00000342503 C1QBPQ07021 282 aaKnown RBP21.29■■□□□ 1
RTN1-202ENST00000342503 NOGQ13253 232 aa21.29■■□□□ 1
RTN1-202ENST00000342503 ZNF211Q13398 564 aaPredicted RBP21.29■■□□□ 1
RTN1-202ENST00000342503 KLHL7Q8IXQ5 586 aa21.29■■□□□ 1
RTN1-202ENST00000342503 RNPC3Q96LT9 517 aaKnown RBP21.29■■□□□ 1
RTN1-202ENST00000342503 STIM2Q9P246 746 aa21.29■■□□□ 1
RTN1-202ENST00000342503 PCDHGC3Q9UN70 934 aa21.29■■□□□ 1
RTN1-202ENST00000342503 PIN4Q9Y237 131 aaKnown RBP21.29■■□□□ 1
RTN1-202ENST00000342503 DERAQ9Y315 318 aa21.29■■□□□ 1
RTN1-202ENST00000342503 KRIT1O00522 736 aa21.28■■□□□ 1
RTN1-202ENST00000342503 SEPT4O43236 478 aa21.28■■□□□ 1
RTN1-202ENST00000342503 SPOPO43791 374 aa21.28■■□□□ 1
RTN1-202ENST00000342503 LSM8O95777 96 aaKnown RBP21.28■■□□□ 1
RTN1-202ENST00000342503 FGGP02679 453 aa21.28■■□□□ 1
RTN1-202ENST00000342503 CTNNA2P26232 953 aa21.28■■□□□ 1
RTN1-202ENST00000342503 PEX5P50542 639 aa21.28■■□□□ 1
RTN1-202ENST00000342503 YARSP54577 528 aaKnown RBP21.28■■□□□ 1
RTN1-202ENST00000342503 CACNB2Q08289 660 aaPredicted RBP21.28■■□□□ 1
RTN1-202ENST00000342503 CXCL17Q6UXB2 119 aa21.28■■□□□ 1
RTN1-202ENST00000342503 UBE2Q2Q8WVN8 375 aa21.28■■□□□ 1
RTN1-202ENST00000342503 ZMAT2Q96NC0 199 aaKnown RBP21.28■■□□□ 1
RTN1-202ENST00000342503 TRIM7Q9C029 511 aa21.28■■□□□ 1
RTN1-202ENST00000342503 TRIM6Q9C030 488 aaPredicted RBP21.28■■□□□ 1
RTN1-202ENST00000342503 L1RE1Q9UN81 338 aa21.28■■□□□ 1
RTN1-202ENST00000342503 STAU1O95793 577 aaKnown RBP21.27■■□□□ 1
RTN1-202ENST00000342503 RARBP10826 455 aa21.27■■□□□ 1
RTN1-202ENST00000342503 ITGA4P13612 1032 aa21.27■■□□□ 1
RTN1-202ENST00000342503 P4HA1P13674 534 aa21.27■■□□□ 1
RTN1-202ENST00000342503 RAD23BP54727 409 aa21.27■■□□□ 1
RTN1-202ENST00000342503 NBPF20Q3BBV1 942 aa21.27■■□□□ 1
RTN1-202ENST00000342503 GSPT2Q8IYD1 628 aaKnown RBP21.27■■□□□ 1
RTN1-202ENST00000342503 C1orf131Q8NDD1 294 aaKnown RBP21.27■■□□□ 1
RTN1-202ENST00000342503 WHAMMQ8TF30 809 aa21.27■■□□□ 1
RTN1-202ENST00000342503 NXF3Q9H4D5 531 aaKnown RBP21.27■■□□□ 1
RTN1-202ENST00000342503 CYP3A43Q9HB55 503 aa21.27■■□□□ 1
RTN1-202ENST00000342503 SPC25Q9HBM1 224 aa21.27■■□□□ 1
RTN1-202ENST00000342503 PAEPP09466 180 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 MYBL2P10244 700 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 CD19P15391 556 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 MMP8P22894 467 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 CTNNA1P35221 906 aaKnown RBP21.26■□□□□ 0.99
RTN1-202ENST00000342503 ORC1Q13415 861 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 PLEKHA7Q6IQ23 1121 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 AADACL2Q6P093 401 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 WDTC1Q8N5D0 677 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 TMEM35BQ8NCS4 154 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 TWNKQ96RR1 684 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 APOL6Q9BWW8 343 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 ELOVL4Q9GZR5 314 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 GTF2IRD1Q9UHL9 959 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 PCDHA3Q9Y5H8 950 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 CCDC66A2RUB6 948 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 CCDC188H7C350 402 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 RAD51CO43502 376 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 CILPO75339 1184 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 CDH5P33151 784 aaPredicted RBP21.26■□□□□ 0.99
RTN1-202ENST00000342503 NKX3-2P78367 333 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 MAMLD1Q13495 774 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 MAP9Q49MG5 647 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 UBXN11Q5T124 520 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 TAF2Q6P1X5 1199 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 DENND1BQ6P3S1 775 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 ALKAL1Q6UXT8 129 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 HDXQ7Z353 690 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 SLC4A11Q8NBS3 891 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 CELF4Q9BZC1 486 aaKnown RBP21.26■□□□□ 0.99
RTN1-202ENST00000342503 ZNF518BQ9C0D4 1074 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 MRPL47Q9HD33 250 aaKnown RBP21.26■□□□□ 0.99
RTN1-202ENST00000342503 HMGXB4Q9UGU5 601 aa21.26■□□□□ 0.99
RTN1-202ENST00000342503 SCN1AP35498 2009 aa21.25■□□□□ 0.99
RTN1-202ENST00000342503 MED7O43513 233 aa21.25■□□□□ 0.99
RTN1-202ENST00000342503 RECQL4O94761 1208 aa21.25■□□□□ 0.99
RTN1-202ENST00000342503 HEXIM1O94992 359 aaKnown RBP21.25■□□□□ 0.99
RTN1-202ENST00000342503 GLI1P08151 1106 aa21.25■□□□□ 0.99
RTN1-202ENST00000342503 AKAP5P24588 427 aa21.25■□□□□ 0.99
RTN1-202ENST00000342503 CCND3P30281 292 aaPredicted RBP21.25■□□□□ 0.99
RTN1-202ENST00000342503 SP3Q02447 781 aa21.25■□□□□ 0.99
RTN1-202ENST00000342503 ZBTB6Q15916 424 aa21.25■□□□□ 0.99
RTN1-202ENST00000342503 GDF6Q6KF10 455 aaPredicted RBP21.25■□□□□ 0.99
RTN1-202ENST00000342503 CAPNS2Q96L46 248 aa21.25■□□□□ 0.99
RTN1-202ENST00000342503 PLEKHA4Q9H4M7 779 aa21.25■□□□□ 0.99
RTN1-202ENST00000342503 RNF186Q9NXI6 227 aa21.25■□□□□ 0.99
RTN1-202ENST00000342503 CNTN3Q9P232 1028 aa21.25■□□□□ 0.99
RTN1-202ENST00000342503 TUBGCP4Q9UGJ1 667 aa21.25■□□□□ 0.99
RTN1-202ENST00000342503 SCINQ9Y6U3 715 aa21.25■□□□□ 0.99
RTN1-202ENST00000342503 MYO1FO00160 1098 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms