RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 SCFD2Q8WU76 684 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 HSPH1Q92598 858 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 PARP2Q9UGN5 583 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 SALL4Q9UJQ4 1053 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 ALG6Q9Y672 507 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 INHBAP08476 426 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 MUTP22033 750 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 GPS1Q13098 491 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 PAPD7Q5XG87 772 aaKnown RBP11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 KCNV1Q6PIU1 500 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 ARHGEF18Q6ZSZ5 1173 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 C1orf186Q6ZWK4 172 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 TRPM8Q7Z2W7 1104 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 GPR142Q7Z601 462 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 SESTD1Q86VW0 696 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 CCDC60Q8IWA6 550 aaPredicted RBP11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 C4orf19Q8IY42 314 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 KCTD17Q8N5Z5 321 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 ZNF564Q8TBZ8 553 aaPredicted RBP11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 COPS5Q92905 334 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 RAB3IPQ96QF0 476 aaPredicted RBP11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 HEY1Q9Y5J3 304 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 BZW2Q9Y6E2 419 aaKnown RBP11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 SUPT20HL2P0C7V6 817 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 TCF7P36402 384 aaPredicted RBP11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 TMED1Q13445 227 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 XKR3Q5GH77 459 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 PPP6R3Q5H9R7 873 aaPredicted RBP11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 SAPCD2Q86UD0 394 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 CDR2LQ86X02 465 aaPredicted RBP11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 JAMLQ86YT9 394 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 RFX6Q8HWS3 928 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 SHCBP1Q8NEM2 672 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 RDM1Q8NG50 284 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 ZNF507Q8TCN5 953 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 DNAJC7Q99615 494 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 FAM213AQ9BRX8 229 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 UBN1Q9NPG3 1134 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 PDGFCQ9NRA1 345 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 LRRC10BA6NIK2 292 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 DNAJC6O75061 913 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 STAMBPO95630 424 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 SHBGP04278 402 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 COMTP21964 271 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 RWDD2BP57060 319 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 QPCTQ16769 361 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 TMEM259Q4ZIN3 620 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 TMEM270Q6UE05 265 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 C7orf31Q8N865 590 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 PTPN18Q99952 460 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 KCTD10Q9H3F6 313 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 C10orf88Q9H8K7 445 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 KMT5AQ9NQR1 393 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 DLGAP2Q9P1A6 1054 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 NAGPAQ9UK23 515 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 PLXNA1Q9UIW2 1896 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 TISP43B9A030 160 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 ZNF862O60290 1169 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 MT-ND3P03897 115 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 TGFB3P10600 412 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 RNASELQ05823 741 aaKnown RBP11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 SREBF2Q12772 1141 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 MAPK7Q13164 816 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 RBBP5Q15291 538 aaKnown RBP11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 GJC2Q5T442 439 aaPredicted RBP11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 CEP70Q8NHQ1 597 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 PYROXD1Q8WU10 500 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 SGSM3Q96HU1 749 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 APOL6Q9BWW8 343 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 RNF14Q9UBS8 474 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 ITIH6Q6UXX5 1313 aa11.05□□□□□ -0.64
CAPRIN1-201ENST00000341394 GRID2IPA4D2P6 1211 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 NOP14P78316 857 aaKnown RBP11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 SMTNL2Q2TAL5 461 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 MAP7D1Q3KQU3 841 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 SH2D4BQ5SQS7 431 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 SLC20A1Q8WUM9 679 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 CCDC97Q96F63 343 aaPredicted RBP11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 TSNARE1Q96NA8 513 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 ANKEF1Q9NU02 776 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 CCT8L1PA6NM43 557 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 CCDC188H7C350 402 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 ZNF263O14978 683 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 RFC1P35251 1148 aaPredicted RBP11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 PDE1BQ01064 536 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 FAM110CQ1W6H9 321 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 GLE1Q53GS7 698 aaKnown RBP11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 METTL7BQ6UX53 244 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 TRIM50Q86XT4 487 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 MMGT1Q8N4V1 131 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 ZSWIM2Q8NEG5 633 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 TMEM143Q96AN5 459 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 ATP6V0A4Q9HBG4 840 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 KCND2Q9NZV8 630 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 ZMYM2Q9UBW7 1377 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 LOC100653049A0A140TA62 436 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 FOXN3O00409 490 aaPredicted RBP11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 KRT34O76011 436 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms