RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 CYP3A43Q9HB55 503 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 CHST12Q9NRB3 414 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 NDE1Q9NXR1 346 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 CNOT8Q9UFF9 292 aaKnown RBP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 ITGA11Q9UKX5 1188 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 LRP6O75581 1613 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 DFFAO00273 331 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 IGF2BP3O00425 579 aaKnown RBP eCLIP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 LZTS3O60299 673 aaPredicted RBP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 ERVK-10P10266 1014 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 IRF1P10914 325 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 BRD3Q15059 726 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 CCNG2Q16589 344 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 CDO1Q16878 200 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 KRT71Q3SY84 523 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 RHOT1Q8IXI2 618 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 FAM9CQ8IZT9 166 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 MCUQ8NE86 351 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 TRPM4Q8TD43 1214 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 SENP6Q9GZR1 1112 aaPredicted RBP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 SMYD2Q9NRG4 433 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 SNX9Q9Y5X1 595 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 EPN1Q9Y6I3 576 aaPredicted RBP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 M0QYT0 321 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 EEF2KO00418 725 aaKnown RBP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 CTDNEP1O95476 244 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 FDPSP14324 419 aaKnown RBP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 ARHGAP25P42331 645 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 ADKP55263 362 aaKnown RBP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 EIF3BP55884 814 aaKnown RBP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 C21orf59P57076 290 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 ACTR2P61160 394 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 PDK1Q15118 436 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 TRMT11Q7Z4G4 463 aaKnown RBP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 TMEM86AQ8N2M4 240 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 CAPNS2Q96L46 248 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 TAAR1Q96RJ0 339 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 PDGFDQ9GZP0 370 aaPredicted RBP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 PPCSQ9HAB8 311 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 PSD3Q9NYI0 1048 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 PCDHAC2Q9Y5I4 1007 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 GNGT2O14610 69 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 GRK3P35626 688 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 NCKAP1LP55160 1127 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 PIGHQ14442 188 aaPredicted RBP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 TEDDM1Q5T9Z0 273 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 C11orf57Q6ZUT1 292 aaPredicted RBP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 CPA6Q8N4T0 437 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 ZNF655Q8N720 491 aaPredicted RBP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 SHDQ96IW2 340 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 DPP3Q9NY33 737 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 CNTNAP2Q9UHC6 1331 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 LRRN2O75325 713 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 TOMM70O94826 608 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 MAPTP10636 758 aaKnown RBP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 LCP1P13796 627 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 RANBP1P43487 201 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 TEAD4Q15561 434 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 NFRKBQ6P4R8 1299 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 TRAPPC11Q7Z392 1133 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 LMNTD2Q8IXW0 634 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 CFAP36Q96G28 342 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 NIF3L1Q9GZT8 377 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 POLD4Q9HCU8 107 aa7.72□□□□□ -1.17
EPHA3-201ENST00000336596 DBR1Q9UK59 544 aaKnown RBP7.72□□□□□ -1.17
EPHA3-201ENST00000336596 COL1A2P08123 1366 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 PDE2AO00408 941 aaPredicted RBP7.71□□□□□ -1.17
EPHA3-201ENST00000336596 ZC3H11AO75152 810 aaKnown RBP eCLIP7.71□□□□□ -1.17
EPHA3-201ENST00000336596 ATP5BP06576 529 aaKnown RBP7.71□□□□□ -1.17
EPHA3-201ENST00000336596 PFKMP08237 780 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 ADORA2AP29274 412 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 NDUFV1P49821 464 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 BCAR1P56945 870 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 NLRP11P59045 1033 aaKnown RBP7.71□□□□□ -1.17
EPHA3-201ENST00000336596 NSUN2Q08J23 767 aaKnown RBP eCLIP7.71□□□□□ -1.17
EPHA3-201ENST00000336596 MAPRE2Q15555 327 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 PPP6R3Q5H9R7 873 aaPredicted RBP7.71□□□□□ -1.17
EPHA3-201ENST00000336596 DEFB128Q7Z7B8 93 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 MCOLN3Q8TDD5 553 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 SAMD11Q96NU1 681 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 FRMD8Q9BZ67 464 aaPredicted RBP7.71□□□□□ -1.17
EPHA3-201ENST00000336596 ASPSCR1Q9BZE9 553 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 IL17RBQ9NRM6 502 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 FZD1Q9UP38 647 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 TRIM33Q9UPN9 1127 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 LRRC37A3O60309 1634 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 EFCAB8A8MWE9 144 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 HGSO14964 777 aaPredicted RBP7.71□□□□□ -1.17
EPHA3-201ENST00000336596 SLC2A4P14672 509 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 CASP1P29466 404 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 DEUP1Q05D60 604 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 PRKAA1Q13131 559 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 ITGA9Q13797 1035 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 GRIK4Q16099 956 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 CCDC38Q502W7 563 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 RASSF3Q86WH2 238 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 ATP8B4Q8TF62 1192 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms