RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 ATICP31939 592 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 CAP1Q01518 475 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 ORC1Q13415 861 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 GNASQ5JWF2 1037 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 MFSD14CQ5VZR4 134 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 NOTUMQ6P988 496 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 ADAT2Q7Z6V5 191 aaKnown RBP19.04■□□□□ 0.64
ACTB-201ENST00000331789 RUBCNQ92622 972 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 DDX47Q9H0S4 455 aaKnown RBP19.04■□□□□ 0.64
ACTB-201ENST00000331789 NR2E1Q9Y466 385 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 ZSCAN5CA6NGD5 496 aaPredicted RBP19.04■□□□□ 0.64
ACTB-201ENST00000331789 GJB6O95452 261 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 PGK1P00558 417 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 CTNNA2P26232 953 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 RAD23BP54727 409 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 RBP5P82980 135 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 C1QBPQ07021 282 aaKnown RBP19.04■□□□□ 0.64
ACTB-201ENST00000331789 APBB1IPQ7Z5R6 666 aaPredicted RBP19.04■□□□□ 0.64
ACTB-201ENST00000331789 CD302Q8IX05 232 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 WDTC1Q8N5D0 677 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 C1orf131Q8NDD1 294 aaKnown RBP19.04■□□□□ 0.64
ACTB-201ENST00000331789 WHAMMQ8TF30 809 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 VCPIP1Q96JH7 1222 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 HHIPL1Q96JK4 782 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 GDAP1L1Q96MZ0 367 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 RNF19AQ9NV58 838 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 HMGXB4Q9UGU5 601 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 ITGA11Q9UKX5 1188 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 PCDHA3Q9Y5H8 950 aa19.04■□□□□ 0.64
ACTB-201ENST00000331789 AOC2O75106 756 aa19.03■□□□□ 0.64
ACTB-201ENST00000331789 CD19P15391 556 aa19.03■□□□□ 0.64
ACTB-201ENST00000331789 HOXC8P31273 242 aa19.03■□□□□ 0.64
ACTB-201ENST00000331789 CTNNA1P35221 906 aaKnown RBP19.03■□□□□ 0.64
ACTB-201ENST00000331789 GJA9P57773 515 aa19.03■□□□□ 0.64
ACTB-201ENST00000331789 GUCY2DQ02846 1103 aa19.03■□□□□ 0.64
ACTB-201ENST00000331789 PRKCZQ05513 592 aa19.03■□□□□ 0.64
ACTB-201ENST00000331789 MAMLD1Q13495 774 aa19.03■□□□□ 0.64
ACTB-201ENST00000331789 CASP8Q14790 479 aa19.03■□□□□ 0.64
ACTB-201ENST00000331789 MAP9Q49MG5 647 aa19.03■□□□□ 0.64
ACTB-201ENST00000331789 ZBTB9Q96C00 473 aa19.03■□□□□ 0.64
ACTB-201ENST00000331789 ZMAT2Q96NC0 199 aaKnown RBP19.03■□□□□ 0.64
ACTB-201ENST00000331789 TWNKQ96RR1 684 aa19.03■□□□□ 0.64
ACTB-201ENST00000331789 APOL6Q9BWW8 343 aa19.03■□□□□ 0.64
ACTB-201ENST00000331789 ELOVL4Q9GZR5 314 aa19.03■□□□□ 0.64
ACTB-201ENST00000331789 VRTNQ9H8Y1 702 aa19.03■□□□□ 0.64
ACTB-201ENST00000331789 EPB41L5Q9HCM4 733 aa19.03■□□□□ 0.64
ACTB-201ENST00000331789 SCN1AP35498 2009 aa19.02■□□□□ 0.64
ACTB-201ENST00000331789 CCDC188H7C350 402 aa19.02■□□□□ 0.64
ACTB-201ENST00000331789 SART1O43290 800 aaKnown RBP19.02■□□□□ 0.64
ACTB-201ENST00000331789 PYGMP11217 842 aa19.02■□□□□ 0.64
ACTB-201ENST00000331789 MMP8P22894 467 aa19.02■□□□□ 0.64
ACTB-201ENST00000331789 TNNT3P45378 269 aaPredicted RBP19.02■□□□□ 0.64
ACTB-201ENST00000331789 PCBP1Q15365 356 aaKnown RBP eCLIP19.02■□□□□ 0.645e-27■■■■■ 34.2
ACTB-201ENST00000331789 KCTD19Q17RG1 926 aaPredicted RBP19.02■□□□□ 0.64
ACTB-201ENST00000331789 PLEKHA7Q6IQ23 1121 aa19.02■□□□□ 0.64
ACTB-201ENST00000331789 DENND1BQ6P3S1 775 aa19.02■□□□□ 0.64
ACTB-201ENST00000331789 CXCL17Q6UXB2 119 aa19.02■□□□□ 0.64
ACTB-201ENST00000331789 NT5DC4Q86YG4 428 aa19.02■□□□□ 0.64
ACTB-201ENST00000331789 AENQ8WTP8 325 aaKnown RBP19.02■□□□□ 0.64
ACTB-201ENST00000331789 SNX27Q96L92 541 aa19.02■□□□□ 0.64
ACTB-201ENST00000331789 NXF3Q9H4D5 531 aaKnown RBP19.02■□□□□ 0.64
ACTB-201ENST00000331789 PLEKHA5Q9HAU0 1116 aa19.02■□□□□ 0.64
ACTB-201ENST00000331789 GDF3Q9NR23 364 aa19.02■□□□□ 0.64
ACTB-201ENST00000331789 PCDHGC3Q9UN70 934 aa19.02■□□□□ 0.64
ACTB-201ENST00000331789 PIN4Q9Y237 131 aaKnown RBP19.02■□□□□ 0.64
ACTB-201ENST00000331789 ESYT3A0FGR9 886 aa19.02■□□□□ 0.63
ACTB-201ENST00000331789 CCDC66A2RUB6 948 aa19.02■□□□□ 0.63
ACTB-201ENST00000331789 LSM8O95777 96 aaKnown RBP19.02■□□□□ 0.63
ACTB-201ENST00000331789 GNAT1P11488 350 aa19.02■□□□□ 0.63
ACTB-201ENST00000331789 CRYBB1P53674 252 aaPredicted RBP19.02■□□□□ 0.63
ACTB-201ENST00000331789 TRADDQ15628 312 aa19.02■□□□□ 0.63
ACTB-201ENST00000331789 PPP1R2P3Q6NXS1 205 aa19.02■□□□□ 0.63
ACTB-201ENST00000331789 IFT20Q8IY31 132 aa19.02■□□□□ 0.63
ACTB-201ENST00000331789 SLC4A11Q8NBS3 891 aa19.02■□□□□ 0.63
ACTB-201ENST00000331789 TMEM35BQ8NCS4 154 aa19.02■□□□□ 0.63
ACTB-201ENST00000331789 FAXDC2Q96IV6 333 aa19.02■□□□□ 0.63
ACTB-201ENST00000331789 MTG1Q9BT17 334 aaPredicted RBP19.02■□□□□ 0.63
ACTB-201ENST00000331789 MYO1FO00160 1098 aa19.01■□□□□ 0.63
ACTB-201ENST00000331789 CILPO75339 1184 aa19.01■□□□□ 0.63
ACTB-201ENST00000331789 AKAP5P24588 427 aa19.01■□□□□ 0.63
ACTB-201ENST00000331789 AXLP30530 894 aa19.01■□□□□ 0.63
ACTB-201ENST00000331789 YARSP54577 528 aaKnown RBP19.01■□□□□ 0.63
ACTB-201ENST00000331789 NBPF20Q3BBV1 942 aa19.01■□□□□ 0.63
ACTB-201ENST00000331789 DAB2IPQ5VWQ8 1189 aa19.01■□□□□ 0.63
ACTB-201ENST00000331789 NME8Q8N427 588 aa19.01■□□□□ 0.63
ACTB-201ENST00000331789 CASKIN2Q8WXE0 1202 aa19.01■□□□□ 0.63
ACTB-201ENST00000331789 C18orf25Q96B23 403 aaPredicted RBP19.01■□□□□ 0.63
ACTB-201ENST00000331789 TRIM6Q9C030 488 aaPredicted RBP19.01■□□□□ 0.63
ACTB-201ENST00000331789 CYP3A43Q9HB55 503 aa19.01■□□□□ 0.63
ACTB-201ENST00000331789 ERVK-5Q9HDB9 667 aa19.01■□□□□ 0.63
ACTB-201ENST00000331789 PDCD11Q14690 1871 aaKnown RBP19.01■□□□□ 0.63
ACTB-201ENST00000331789 PPEF2O14830 753 aa19■□□□□ 0.63
ACTB-201ENST00000331789 KPNA6O60684 536 aa19■□□□□ 0.63
ACTB-201ENST00000331789 ALDH1A1P00352 501 aa19■□□□□ 0.63
ACTB-201ENST00000331789 PAEPP09466 180 aa19■□□□□ 0.63
ACTB-201ENST00000331789 P4HA1P13674 534 aa19■□□□□ 0.63
ACTB-201ENST00000331789 TNFRSF8P28908 595 aa19■□□□□ 0.63
ACTB-201ENST00000331789 CARSP49589 748 aaKnown RBP19■□□□□ 0.63
ACTB-201ENST00000331789 CACNB2Q08289 660 aaPredicted RBP19■□□□□ 0.63
ACTB-201ENST00000331789 GLRA4Q5JXX5 417 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms