RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 MTHFRP42898 656 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 NPTX2P47972 431 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 ZNF131P52739 623 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 SLC12A3P55017 1021 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 POU5F1Q01860 360 aaKnown RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 DSG1Q02413 1049 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 TUSC3Q13454 348 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 PTPN14Q15678 1187 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 KYAT1Q16773 422 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 GLIPR1L2Q4G1C9 344 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 XKR4Q5GH76 650 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 ATF7IP2Q5U623 682 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 ZPBP2Q6X784 338 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 SND1Q7KZF4 910 aaKnown RBP eCLIP6.95□□□□□ -1.3
SMG1-201ENST00000330588 ZNF280BQ86YH2 543 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 DAW1Q8N136 415 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 CMASQ8NFW8 434 aaPredicted RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 VN1R2Q8NFZ6 395 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 SLC22A17Q8WUG5 538 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 CALML4Q96GE6 196 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 MYO19Q96H55 970 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 CDK5RAP3Q96JB5 506 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 RIPOR3Q96MK2 946 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 UROC1Q96N76 676 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 GAD1Q99259 594 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 MRPL4Q9BYD3 311 aaKnown RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 KCNH6Q9H252 994 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 ADAM7Q9H2U9 754 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 IGFLR1Q9H665 355 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 RXFP1Q9HBX9 757 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 PTPRHQ9HD43 1115 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 MRPL17Q9NRX2 175 aaKnown RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 TOPORSQ9NS56 1045 aaPredicted RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 CHST7Q9NS84 486 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 LARSQ9P2J5 1176 aaKnown RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 DNAJB4Q9UDY4 337 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 EGFL7Q9UHF1 273 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 USP15Q9Y4E8 981 aaPredicted RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 TCF20Q9UGU0 1960 aaKnown RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 DENND4AQ7Z401 1863 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.94□□□□□ -1.3
SMG1-201ENST00000330588 VWA3AA6NCI4 1184 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 HIDE1A8MVS5 230 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 PRR33A8MZF0 331 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 E9PMD0 336 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 RBAK-RBAKDNI3L0D1 243 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 DCXO43602 365 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 B4GALT3O60512 393 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 PIGRP01833 764 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 URODP06132 367 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 THP07101 528 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 POU2F2P09086 479 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 IBSPP21815 317 aaPredicted RBP6.94□□□□□ -1.3
SMG1-201ENST00000330588 PAX3P23760 479 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 GLUD2P49448 558 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 SCNN1GP51170 649 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 NRG1Q02297 640 aaPredicted RBP6.94□□□□□ -1.3
SMG1-201ENST00000330588 KIAA0319Q5VV43 1072 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 KIAA1841Q6NSI8 718 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 C16orf46Q6P387 395 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 SYCE2Q6PIF2 218 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 C15orf39Q6ZRI6 1047 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 CABP7Q86V35 215 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 TMEM173Q86WV6 379 aaPredicted RBP6.94□□□□□ -1.3
SMG1-201ENST00000330588 BCL7CQ8WUZ0 217 aaPredicted RBP6.94□□□□□ -1.3
SMG1-201ENST00000330588 NECAB3Q96P71 396 aaPredicted RBP6.94□□□□□ -1.3
SMG1-201ENST00000330588 PNMA5Q96PV4 448 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 ACO2Q99798 780 aaKnown RBP6.94□□□□□ -1.3
SMG1-201ENST00000330588 SSBP4Q9BWG4 385 aaPredicted RBP6.94□□□□□ -1.3
SMG1-201ENST00000330588 VN1R3Q9BXE9 311 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 ST6GALNAC4Q9H4F1 302 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 SFXN1Q9H9B4 322 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 KMT5AQ9NQR1 393 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 SLC38A7Q9NVC3 462 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 MARCH5Q9NX47 278 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 SEL1LQ9UBV2 794 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 ADAM28Q9UKQ2 775 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 BARX2Q9UMQ3 279 aaPredicted RBP6.94□□□□□ -1.3
SMG1-201ENST00000330588 NR2E1Q9Y466 385 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 HCFC2Q9Y5Z7 792 aa6.94□□□□□ -1.3
SMG1-201ENST00000330588 SF3B1O75533 1304 aaKnown RBP eCLIP6.93□□□□□ -1.38e-6■■■■■ 107
SMG1-201ENST00000330588 KRTAP9-6A0A140TA67 174 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 PP2D1A8MPX8 630 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 ABLIM1O14639 778 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 PTGESO14684 152 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 ICMTO60725 284 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 TOM1L1O75674 476 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 RECQL4O94761 1208 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 POMCP01189 267 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 PLA2G4BP0C869 781 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 SYT1P21579 422 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 HOXA9P31269 272 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 PBX3P40426 434 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 UBA7P41226 1012 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 CLCN4P51793 760 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 YARSP54577 528 aaKnown RBP6.93□□□□□ -1.3
SMG1-201ENST00000330588 NCKAP1LP55160 1127 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 RAC1P63000 192 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 STRN3Q13033 797 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 RESTQ13127 1097 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms