RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 RASSF3Q86WH2 238 aa16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 MINDY1Q8N5J2 469 aa16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 CNOT6LQ96LI5 555 aaKnown RBP16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 FAM83CQ9BQN1 747 aa16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 NFKBIZQ9BYH8 718 aa16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 GKN1Q9NS71 199 aa16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 SLC6A14Q9UN76 642 aa16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 APOBEC2Q9Y235 224 aaKnown RBP16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 PCDH15Q96QU1 1955 aa16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 PIEZO2Q9H5I5 2752 aa16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 DKC1O60832 514 aaKnown RBP eCLIP16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 HMGB1P09429 215 aaKnown RBP16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 HOXD12P35452 270 aa16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 GALK1P51570 392 aa16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 GFPT1Q06210 699 aaPredicted RBP16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 CAPSQ13938 189 aa16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 RTN1Q16799 776 aa16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 PFKFB3Q16875 520 aaPredicted RBP16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 GPR158Q5T848 1215 aa16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 PEAR1Q5VY43 1037 aaPredicted RBP16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 SYNE3Q6ZMZ3 975 aa16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 TOGARAM2Q6ZUX3 1019 aa16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 TMEFF1Q8IYR6 380 aa16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 UROC1Q96N76 676 aa16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 P2RY13Q9BPV8 354 aa16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 LRRC2Q9BYS8 371 aa16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 PRORYQ9H606 182 aa16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 POLMQ9NP87 494 aaPredicted RBP16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 WRAP73Q9P2S5 460 aaPredicted RBP16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 PILRBQ9UKJ0 227 aa16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 YIPF1Q9Y548 306 aa16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 PTPRQQ9UMZ3 2332 aa16.25■□□□□ 0.19
CTHRC1-201ENST00000330295 COL6A6A6NMZ7 2263 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 CAPN8A6NHC0 703 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 EML1O00423 815 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 SYN3O14994 580 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 GNA11P29992 359 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 WEE1P30291 646 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 CFHR1Q03591 330 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 SRSF1Q07955 248 aaKnown RBP eCLIP16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 MRPL58Q14197 206 aaKnown RBP16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 Q4G0T1 1027 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 CTXN3Q4LDR2 81 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 GLRA4Q5JXX5 417 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 APOA5Q6Q788 366 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 GAREM2Q75VX8 874 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 OR2I1PQ8NGU4 316 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 ASAP3Q8TDY4 903 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 CCDC12Q8WUD4 166 aaPredicted RBP16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 EZH1Q92800 747 aaPredicted RBP16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 DCBLD2Q96PD2 775 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 PPP1R10Q96QC0 940 aaKnown RBP16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 FNBP1Q96RU3 617 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 POLR3CQ9BUI4 534 aaPredicted RBP16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 ATXN3LQ9H3M9 355 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 EBF3Q9H4W6 596 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 GOLGA2P5Q9HBQ8 144 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 XPNPEP1Q9NQW7 623 aa16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 DNAAF2Q9NVR5 837 aaKnown RBP16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 GOLGA4Q13439 2230 aaKnown RBP16.24■□□□□ 0.19
CTHRC1-201ENST00000330295 MAP3K13O43283 966 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 SERPINF2P08697 491 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 U2AF2P26368 475 aaKnown RBP eCLIP16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 YWHABP31946 246 aaKnown RBP16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 KCNC4Q03721 635 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 PSMD2Q13200 908 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 PLD1Q13393 1074 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 DUOXA1Q1HG43 343 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 ARHGAP15Q53QZ3 475 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 LYSMD4Q5XG99 296 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 NAIF1Q69YI7 327 aaPredicted RBP16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 TRIM68Q6AZZ1 485 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 RNF19BQ6ZMZ0 732 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 TMPRSS7Q7RTY8 843 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 SLCO6A1Q86UG4 719 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 MDGA1Q8NFP4 955 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 OLIG1Q8TAK6 271 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 CEP76Q8TAP6 659 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 EXOC4Q96A65 974 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 DNAJC25Q9H1X3 360 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 CAPN10Q9HC96 672 aa16.23■□□□□ 0.19
CTHRC1-201ENST00000330295 TRIP11Q15643 1979 aa16.22■□□□□ 0.19
CTHRC1-201ENST00000330295 TRABD2BA6NFA1 517 aa16.22■□□□□ 0.19
CTHRC1-201ENST00000330295 EPB41L2O43491 1005 aaKnown RBP16.22■□□□□ 0.19
CTHRC1-201ENST00000330295 ITPKAP23677 461 aa16.22■□□□□ 0.19
CTHRC1-201ENST00000330295 SLC14A1Q13336 389 aa16.22■□□□□ 0.19
CTHRC1-201ENST00000330295 TSGA10IPQ3SY00 556 aa16.22■□□□□ 0.19
CTHRC1-201ENST00000330295 XKR9Q5GH70 373 aa16.22■□□□□ 0.19
CTHRC1-201ENST00000330295 SPDYCQ5MJ68 293 aa16.22■□□□□ 0.19
CTHRC1-201ENST00000330295 OTUD6AQ7L8S5 288 aa16.22■□□□□ 0.19
CTHRC1-201ENST00000330295 ETNPPLQ8TBG4 499 aa16.22■□□□□ 0.19
CTHRC1-201ENST00000330295 SPACA7Q96KW9 195 aa16.22■□□□□ 0.19
CTHRC1-201ENST00000330295 ARHGAP33O14559 1287 aa16.21■□□□□ 0.19
CTHRC1-201ENST00000330295 P4HBP07237 508 aaKnown RBP16.21■□□□□ 0.19
CTHRC1-201ENST00000330295 CPB1P15086 417 aa16.21■□□□□ 0.19
CTHRC1-201ENST00000330295 GLRA2P23416 452 aa16.21■□□□□ 0.19
CTHRC1-201ENST00000330295 ITPKBP27987 946 aa16.21■□□□□ 0.19
CTHRC1-201ENST00000330295 P2RY2P41231 377 aa16.21■□□□□ 0.19
CTHRC1-201ENST00000330295 EPHB3P54753 998 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms