RNA–Protein interactions for RNA: ENST00000327351.6

CCDC107-201, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 804 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-201ENST00000327351 GLRA4Q5JXX5 417 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 SMYD5Q6GMV2 418 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 AGMOQ6ZNB7 445 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 UBR7Q8N806 425 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 LPPQ93052 612 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 FAXDC2Q96IV6 333 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 GAS2L1Q99501 681 aaPredicted RBP18.32■□□□□ 0.52
CCDC107-201ENST00000327351 CDX2Q99626 313 aaPredicted RBP18.32■□□□□ 0.52
CCDC107-201ENST00000327351 ARID3AQ99856 593 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 NIF3L1Q9GZT8 377 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 DEF6Q9H4E7 631 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 RNF19AQ9NV58 838 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 TUBGCP4Q9UGJ1 667 aa18.32■□□□□ 0.52
CCDC107-201ENST00000327351 PTGESO14684 152 aa18.31■□□□□ 0.52
CCDC107-201ENST00000327351 CYP26A1O43174 497 aa18.31■□□□□ 0.52
CCDC107-201ENST00000327351 XPOTO43592 962 aaKnown RBP18.31■□□□□ 0.52
CCDC107-201ENST00000327351 ATF7P17544 494 aaPredicted RBP18.31■□□□□ 0.52
CCDC107-201ENST00000327351 CYP3A5P20815 502 aa18.31■□□□□ 0.52
CCDC107-201ENST00000327351 CLCN1P35523 988 aa18.31■□□□□ 0.52
CCDC107-201ENST00000327351 USP8P40818 1118 aa18.31■□□□□ 0.52
CCDC107-201ENST00000327351 FAM189BP81408 668 aa18.31■□□□□ 0.52
CCDC107-201ENST00000327351 ZNF598Q86UK7 904 aaKnown RBP18.31■□□□□ 0.52
CCDC107-201ENST00000327351 ECHDC2Q86YB7 292 aa18.31■□□□□ 0.52
CCDC107-201ENST00000327351 PGBD4Q96DM1 585 aa18.31■□□□□ 0.52
CCDC107-201ENST00000327351 HPDLQ96IR7 371 aa18.31■□□□□ 0.52
CCDC107-201ENST00000327351 PPP1R13BQ96KQ4 1090 aa18.31■□□□□ 0.52
CCDC107-201ENST00000327351 GUCD1Q96NT3 240 aa18.31■□□□□ 0.52
CCDC107-201ENST00000327351 TGS1Q96RS0 853 aaKnown RBP18.31■□□□□ 0.52
CCDC107-201ENST00000327351 SYT11Q9BT88 431 aa18.31■□□□□ 0.52
CCDC107-201ENST00000327351 PRDM12Q9H4Q4 367 aa18.31■□□□□ 0.52
CCDC107-201ENST00000327351 CNTN6Q9UQ52 1028 aa18.31■□□□□ 0.52
CCDC107-201ENST00000327351 R3HCC1Q9Y3T6 440 aaKnown RBP18.31■□□□□ 0.52
CCDC107-201ENST00000327351 PDCD11Q14690 1871 aaKnown RBP18.31■□□□□ 0.52
CCDC107-201ENST00000327351 LINC01553A4QN01 128 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 C9IYK1 514 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 ZNF263O14978 683 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 CLSTN1O94985 981 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 KRT83P78385 493 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 ZNF667Q5HYK9 610 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 C9orf57Q5W0N0 161 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 FIBCD1Q8N539 461 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 GSTCDQ8NEC7 633 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 OLIG1Q8TAK6 271 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 SP7Q8TDD2 431 aaPredicted RBP18.3■□□□□ 0.52
CCDC107-201ENST00000327351 MYLIPQ8WY64 445 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 ARNTL2Q8WYA1 636 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 ZFP42Q96MM3 310 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 SAMD11Q96NU1 681 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 PPP1R10Q96QC0 940 aaKnown RBP18.3■□□□□ 0.52
CCDC107-201ENST00000327351 GAD1Q99259 594 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 ELAC1Q9H777 363 aaKnown RBP18.3■□□□□ 0.52
CCDC107-201ENST00000327351 UBN1Q9NPG3 1134 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 RRAGDQ9NQL2 400 aaPredicted RBP18.3■□□□□ 0.52
CCDC107-201ENST00000327351 TMEM161AQ9NX61 479 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 MIOSQ9NXC5 875 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 POLIQ9UNA4 740 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 STXBP5LQ9Y2K9 1186 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 PCDHB4Q9Y5E5 795 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 CHD9Q3L8U1 2897 aa18.3■□□□□ 0.52
CCDC107-201ENST00000327351 SZT2Q5T011 3432 aa18.29■□□□□ 0.52
CCDC107-201ENST00000327351 ANO9A1A5B4 782 aa18.29■□□□□ 0.52
CCDC107-201ENST00000327351 PIRO00625 290 aa18.29■□□□□ 0.52
CCDC107-201ENST00000327351 HOXA2O43364 376 aa18.29■□□□□ 0.52
CCDC107-201ENST00000327351 OFD1O75665 1012 aa18.29■□□□□ 0.52
CCDC107-201ENST00000327351 DGKIO75912 1065 aa18.29■□□□□ 0.52
CCDC107-201ENST00000327351 KRT5P13647 590 aa18.29■□□□□ 0.52
CCDC107-201ENST00000327351 FOSL2P15408 326 aa18.29■□□□□ 0.52
CCDC107-201ENST00000327351 ASPAP45381 313 aa18.29■□□□□ 0.52
CCDC107-201ENST00000327351 CYP27A1Q02318 531 aa18.29■□□□□ 0.52
CCDC107-201ENST00000327351 GFPT1Q06210 699 aaPredicted RBP18.29■□□□□ 0.52
CCDC107-201ENST00000327351 SOX4Q06945 474 aaPredicted RBP18.29■□□□□ 0.52
CCDC107-201ENST00000327351 BTG3Q14201 252 aaPredicted RBP18.29■□□□□ 0.52
CCDC107-201ENST00000327351 SPA17Q15506 151 aa18.29■□□□□ 0.52
CCDC107-201ENST00000327351 SLC18A3Q16572 532 aa18.29■□□□□ 0.52
CCDC107-201ENST00000327351 LRRC52Q8N7C0 313 aa18.29■□□□□ 0.52
CCDC107-201ENST00000327351 AGPAT1Q99943 283 aa18.29■□□□□ 0.52
CCDC107-201ENST00000327351 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.29■□□□□ 0.52
CCDC107-201ENST00000327351 CERS4Q9HA82 394 aa18.29■□□□□ 0.52
CCDC107-201ENST00000327351 NXF1Q9UBU9 619 aaKnown RBP18.29■□□□□ 0.52
CCDC107-201ENST00000327351 A0A087X0T9 212 aa18.28■□□□□ 0.52
CCDC107-201ENST00000327351 ARL5CA6NH57 179 aa18.28■□□□□ 0.52
CCDC107-201ENST00000327351 DDX3XO00571 662 aaKnown RBP eCLIP18.28■□□□□ 0.522e-13■■■■■ 35.7
CCDC107-201ENST00000327351 PPEF2O14830 753 aa18.28■□□□□ 0.52
CCDC107-201ENST00000327351 ARHGEF15O94989 841 aa18.28■□□□□ 0.52
CCDC107-201ENST00000327351 IPO7O95373 1038 aaKnown RBP18.28■□□□□ 0.52
CCDC107-201ENST00000327351 EOMESO95936 686 aa18.28■□□□□ 0.52
CCDC107-201ENST00000327351 FAM228BP0C875 321 aa18.28■□□□□ 0.52
CCDC107-201ENST00000327351 TNFAIP3P21580 790 aa18.28■□□□□ 0.52
CCDC107-201ENST00000327351 LRPAP1P30533 357 aa18.28■□□□□ 0.52
CCDC107-201ENST00000327351 MLH1P40692 756 aa18.28■□□□□ 0.52
CCDC107-201ENST00000327351 ERVK-21P61565 698 aa18.28■□□□□ 0.52
CCDC107-201ENST00000327351 MYO1EQ12965 1108 aa18.28■□□□□ 0.52
CCDC107-201ENST00000327351 WDR72Q3MJ13 1102 aa18.28■□□□□ 0.52
CCDC107-201ENST00000327351 VPS36Q86VN1 386 aa18.28■□□□□ 0.52
CCDC107-201ENST00000327351 CMTR2Q8IYT2 770 aaKnown RBP18.28■□□□□ 0.52
CCDC107-201ENST00000327351 RNF169Q8NCN4 708 aa18.28■□□□□ 0.52
CCDC107-201ENST00000327351 SLC30A5Q8TAD4 765 aa18.28■□□□□ 0.52
CCDC107-201ENST00000327351 BCO2Q9BYV7 579 aa18.28■□□□□ 0.52
CCDC107-201ENST00000327351 RSAD1Q9HA92 442 aa18.28■□□□□ 0.52
CCDC107-201ENST00000327351 CYP3A43Q9HB55 503 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms