RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 DLK2Q6UY11 383 aa21.01■□□□□ 0.95
CRLF3-201ENST00000324238 MCF2L2Q86YR7 1114 aa21.01■□□□□ 0.95
CRLF3-201ENST00000324238 CCDC89Q8N998 374 aa21.01■□□□□ 0.95
CRLF3-201ENST00000324238 POLR3FQ9H1D9 316 aaPredicted RBP21.01■□□□□ 0.95
CRLF3-201ENST00000324238 PXMP2Q9NR77 195 aa21.01■□□□□ 0.95
CRLF3-201ENST00000324238 ARHGEF3Q9NR81 526 aa21.01■□□□□ 0.95
CRLF3-201ENST00000324238 COL4A5P29400 1685 aa21.01■□□□□ 0.95
CRLF3-201ENST00000324238 KRT1P04264 644 aa21.01■□□□□ 0.95
CRLF3-201ENST00000324238 NFX1Q12986 1120 aaKnown RBP21.01■□□□□ 0.95
CRLF3-201ENST00000324238 STRN3Q13033 797 aa21.01■□□□□ 0.95
CRLF3-201ENST00000324238 CYP4A22Q5TCH4 519 aa21.01■□□□□ 0.95
CRLF3-201ENST00000324238 SNRNP48Q6IEG0 339 aaKnown RBP21.01■□□□□ 0.95
CRLF3-201ENST00000324238 CCDC77Q9BR77 488 aa21.01■□□□□ 0.95
CRLF3-201ENST00000324238 DCTN4Q9UJW0 460 aa21.01■□□□□ 0.95
CRLF3-201ENST00000324238 CHKBQ9Y259 395 aa21.01■□□□□ 0.95
CRLF3-201ENST00000324238 NUB1Q9Y5A7 615 aa21.01■□□□□ 0.95
CRLF3-201ENST00000324238 KLRC2P26717 231 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 HMGCS2P54868 508 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 CCNG2Q16589 344 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 KCNT1Q5JUK3 1230 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 TRIM68Q6AZZ1 485 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 CCDC60Q8IWA6 550 aaPredicted RBP21■□□□□ 0.95
CRLF3-201ENST00000324238 ZMYND8Q9ULU4 1186 aaPredicted RBP21■□□□□ 0.95
CRLF3-201ENST00000324238 NR3C2P08235 984 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 IL9RQ01113 521 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 FSTL1Q12841 308 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 RSRC1Q96IZ7 334 aaKnown RBP21■□□□□ 0.95
CRLF3-201ENST00000324238 MCEEQ96PE7 176 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 TARS2Q9BW92 718 aaKnown RBP21■□□□□ 0.95
CRLF3-201ENST00000324238 ST6GALNAC4Q9H4F1 302 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 EBF2Q9HAK2 575 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 ZNRF3Q9ULT6 936 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 PCDHA10Q9Y5I2 948 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 SSTR1P30872 391 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 NOMO3P69849 1222 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 OGDHQ02218 1023 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 GCNT1Q02742 428 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 RBBP8NLQ8NC74 664 aaPredicted RBP21■□□□□ 0.95
CRLF3-201ENST00000324238 GADD45GIP1Q8TAE8 222 aaPredicted RBP21■□□□□ 0.95
CRLF3-201ENST00000324238 TMC2Q8TDI7 906 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 ZNF526Q8TF50 670 aaPredicted RBP21■□□□□ 0.95
CRLF3-201ENST00000324238 FBXL18Q96ME1 805 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 MOV10L1Q9BXT6 1211 aaKnown RBP21■□□□□ 0.95
CRLF3-201ENST00000324238 KIAA1683Q9H0B3 1180 aa21■□□□□ 0.95
CRLF3-201ENST00000324238 LRRD1A4D1F6 860 aa20.99■□□□□ 0.95
CRLF3-201ENST00000324238 LRRIQ4A6NIV6 560 aa20.99■□□□□ 0.95
CRLF3-201ENST00000324238 TTLL13PA6NNM8 815 aa20.99■□□□□ 0.95
CRLF3-201ENST00000324238 CENPCQ03188 943 aa20.99■□□□□ 0.95
CRLF3-201ENST00000324238 PDIA2Q13087 525 aaKnown RBP20.99■□□□□ 0.95
CRLF3-201ENST00000324238 ASRGL1Q7L266 308 aa20.99■□□□□ 0.95
CRLF3-201ENST00000324238 EEPD1Q7L9B9 569 aa20.99■□□□□ 0.95
CRLF3-201ENST00000324238 TRABD2AQ86V40 505 aa20.99■□□□□ 0.95
CRLF3-201ENST00000324238 NUMBLQ9Y6R0 609 aa20.99■□□□□ 0.95
CRLF3-201ENST00000324238 SGK1O00141 431 aa20.99■□□□□ 0.95
CRLF3-201ENST00000324238 MAPK13O15264 365 aa20.99■□□□□ 0.95
CRLF3-201ENST00000324238 ACO1P21399 889 aaKnown RBP20.99■□□□□ 0.95
CRLF3-201ENST00000324238 ERFP50548 548 aa20.99■□□□□ 0.95
CRLF3-201ENST00000324238 SCARA5Q6ZMJ2 495 aa20.99■□□□□ 0.95
CRLF3-201ENST00000324238 ANKRD35Q8N283 1001 aa20.99■□□□□ 0.95
CRLF3-201ENST00000324238 MAK16Q9BXY0 300 aaKnown RBP20.99■□□□□ 0.95
CRLF3-201ENST00000324238 NOP53Q9NZM5 478 aaKnown RBP20.99■□□□□ 0.95
CRLF3-201ENST00000324238 NEBLO76041 1014 aa20.98■□□□□ 0.95
CRLF3-201ENST00000324238 CYP1A1P04798 512 aaPredicted RBP20.98■□□□□ 0.95
CRLF3-201ENST00000324238 EDN1P05305 212 aa20.98■□□□□ 0.95
CRLF3-201ENST00000324238 BRD2P25440 801 aaKnown RBP20.98■□□□□ 0.95
CRLF3-201ENST00000324238 ORC1Q13415 861 aa20.98■□□□□ 0.95
CRLF3-201ENST00000324238 LIN9Q5TKA1 542 aa20.98■□□□□ 0.95
CRLF3-201ENST00000324238 TJP2Q9UDY2 1190 aa20.98■□□□□ 0.95
CRLF3-201ENST00000324238 ZBED4O75132 1171 aa20.98■□□□□ 0.95
CRLF3-201ENST00000324238 LYPLA2O95372 231 aa20.98■□□□□ 0.95
CRLF3-201ENST00000324238 ASMTLO95671 621 aa20.98■□□□□ 0.95
CRLF3-201ENST00000324238 SLC1A1P43005 524 aa20.98■□□□□ 0.95
CRLF3-201ENST00000324238 RIPK1Q13546 671 aa20.98■□□□□ 0.95
CRLF3-201ENST00000324238 STAT4Q14765 748 aa20.98■□□□□ 0.95
CRLF3-201ENST00000324238 NPHS2Q9NP85 383 aa20.98■□□□□ 0.95
CRLF3-201ENST00000324238 AGO2Q9UKV8 859 aaKnown RBP20.98■□□□□ 0.95
CRLF3-201ENST00000324238 LIASO43766 372 aa20.97■□□□□ 0.95
CRLF3-201ENST00000324238 CST3P01034 146 aaPredicted RBP20.97■□□□□ 0.95
CRLF3-201ENST00000324238 PRKCEQ02156 737 aa20.97■□□□□ 0.95
CRLF3-201ENST00000324238 ZNF252P-AS1Q0IIN9 211 aa20.97■□□□□ 0.95
CRLF3-201ENST00000324238 CUL2Q13617 745 aa20.97■□□□□ 0.95
CRLF3-201ENST00000324238 DEFB132Q7Z7B7 95 aa20.97■□□□□ 0.95
CRLF3-201ENST00000324238 ZBTB33Q86T24 672 aa20.97■□□□□ 0.95
CRLF3-201ENST00000324238 ABRAQ8N0Z2 381 aa20.97■□□□□ 0.95
CRLF3-201ENST00000324238 ZWILCHQ9H900 591 aa20.97■□□□□ 0.95
CRLF3-201ENST00000324238 AVENQ9NQS1 362 aaPredicted RBP20.97■□□□□ 0.95
CRLF3-201ENST00000324238 STK32BQ9NY57 414 aa20.97■□□□□ 0.95
CRLF3-201ENST00000324238 WDR46O15213 610 aaKnown RBP20.97■□□□□ 0.95
CRLF3-201ENST00000324238 PMM2O15305 246 aa20.97■□□□□ 0.95
CRLF3-201ENST00000324238 UNC5CO95185 931 aa20.97■□□□□ 0.95
CRLF3-201ENST00000324238 C4BPAP04003 597 aaKnown RBP20.97■□□□□ 0.95
CRLF3-201ENST00000324238 GM2AP17900 193 aa20.97■□□□□ 0.95
CRLF3-201ENST00000324238 EPHB2P29323 1055 aa20.97■□□□□ 0.95
CRLF3-201ENST00000324238 LACTBP83111 547 aaPredicted RBP20.97■□□□□ 0.95
CRLF3-201ENST00000324238 ZACNQ401N2 412 aa20.97■□□□□ 0.95
CRLF3-201ENST00000324238 ANKRD22Q5VYY1 191 aa20.97■□□□□ 0.95
CRLF3-201ENST00000324238 ZCCHC9Q8N567 271 aaKnown RBP20.97■□□□□ 0.95
CRLF3-201ENST00000324238 IFT74Q96LB3 600 aa20.97■□□□□ 0.95
CRLF3-201ENST00000324238 RBAKQ9NYW8 714 aaPredicted RBP20.97■□□□□ 0.95
CRLF3-201ENST00000324238 LGALS13Q9UHV8 139 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms