RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 A6NJY4 79 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 NBNO60934 754 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 TACC1O75410 805 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 EFEMP2O95967 443 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 AFPP02771 609 aaKnown RBP3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 MYBP10242 640 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 NR2F2P24468 414 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 IGBP1P78318 339 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 GCNT1Q02742 428 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 MTA1Q13330 715 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 TUSC3Q13454 348 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 SNRNP35Q16560 246 aaKnown RBP3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 TPD52L1Q16890 204 aaPredicted RBP3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 DUOXA2Q1HG44 320 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 LRIT3Q3SXY7 679 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 VWA3BQ502W6 1294 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 SPECC1Q5M775 1068 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 TMEM63BQ5T3F8 832 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 UNC93AQ86WB7 457 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 ZNF677Q86XU0 584 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 LRRC71Q8N4P6 559 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 CSGALNACT2Q8N6G5 542 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 BHMTQ93088 406 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 GJA10Q969M2 543 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 PPP1R10Q96QC0 940 aaKnown RBP3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 RPS6KC1Q96S38 1066 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 OSMRQ99650 979 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 COLEC11Q9BWP8 271 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 ZNHIT6Q9NWK9 470 aaKnown RBP3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 CEP72Q9P209 647 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 LRFN2Q9ULH4 789 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 PIN4Q9Y237 131 aaKnown RBP3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 IPPQ9Y573 584 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 PCDHB2Q9Y5E7 798 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 DENND4AQ7Z401 1863 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 SFI1A8K8P3 1242 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 LGALS16A8MUM7 142 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 H7C4K7 107 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 ENPP3O14638 875 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 PQBP1O60828 265 aaKnown RBP3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 VTNP04004 478 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 EN2P19622 333 aaPredicted RBP3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 NMT1P30419 496 aaKnown RBP3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 HOXD13P35453 343 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 ZNF165P49910 485 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 VAMP7P51809 220 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 BPIFB4P59827 614 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 WDR5P61964 334 aaKnown RBP3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 RBP5P82980 135 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 CDK17Q00537 523 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 MYO1EQ12965 1108 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 ADAM9Q13443 819 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 TMEM132DQ14C87 1099 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 MAPRE1Q15691 268 aaKnown RBP3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 EML3Q32P44 896 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 TCP11X2Q5H9J9 407 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 NOMO2Q5JPE7 1267 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 KRT39Q6A163 491 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 SLC39A4Q6P5W5 647 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 DCLRE1AQ6PJP8 1040 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 RNF168Q8IYW5 571 aaPredicted RBP3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 SCML4Q8N228 414 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 FNBP1Q96RU3 617 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 RAD9AQ99638 391 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 DUSP9Q99956 384 aaKnown RBP3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 UBXN6Q9BZV1 441 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 IMPG2Q9BZV3 1241 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 MIS12Q9H081 205 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 TRPV6Q9H1D0 765 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 TSPAN10Q9H1Z9 355 aaPredicted RBP3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 SEMA6BQ9H3T3 888 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 RBAKQ9NYW8 714 aaPredicted RBP3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 EHD2Q9NZN4 543 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 FNIP2Q9P278 1114 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 GDF2Q9UK05 429 aaPredicted RBP3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 CNTN6Q9UQ52 1028 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 IRAK3Q9Y616 596 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 ATG2AQ2TAZ0 1938 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 TRIP11Q15643 1979 aa3.55□□□□□ -1.84
SCAMP1-201ENST00000320280 NUP210Q8TEM1 1887 aaPredicted RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 KIF26AQ9ULI4 1882 aaPredicted RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 TRIM43BA6NCK2 446 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 BECN2A8MW95 431 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 EXOC3O60645 756 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 DGKIO75912 1065 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 FGF19O95750 216 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 SRGAP2CP0DJJ0 459 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 SNX16P57768 344 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 PLD1Q13393 1074 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 KIZQ2M2Z5 673 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 SGSM1Q2NKQ1 1148 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 ZACNQ401N2 412 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 TMEM240Q5SV17 173 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 TWF2Q6IBS0 349 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 PPFIBP1Q86W92 1011 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 SMG8Q8ND04 991 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms