RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 CYB561D2O14569 222 aa29.33■■■□□ 2.29
CTDNEP1-201ENST00000318988 CYP26A1O43174 497 aa29.33■■■□□ 2.29
CTDNEP1-201ENST00000318988 ACO1P21399 889 aaKnown RBP29.33■■■□□ 2.29
CTDNEP1-201ENST00000318988 CDH8P55286 799 aa29.33■■■□□ 2.29
CTDNEP1-201ENST00000318988 IRF2BP2Q7Z5L9 587 aa29.33■■■□□ 2.29
CTDNEP1-201ENST00000318988 TMEM175Q9BSA9 504 aa29.33■■■□□ 2.29
CTDNEP1-201ENST00000318988 ZBED2Q9BTP6 218 aa29.33■■■□□ 2.29
CTDNEP1-201ENST00000318988 COLEC11Q9BWP8 271 aa29.33■■■□□ 2.29
CTDNEP1-201ENST00000318988 DEF6Q9H4E7 631 aa29.33■■■□□ 2.29
CTDNEP1-201ENST00000318988 DNAJB4Q9UDY4 337 aa29.33■■■□□ 2.29
CTDNEP1-201ENST00000318988 FAN1Q9Y2M0 1017 aa29.33■■■□□ 2.29
CTDNEP1-201ENST00000318988 ARHGEF37A1IGU5 675 aa29.32■■■□□ 2.28
CTDNEP1-201ENST00000318988 FECHP22830 423 aa29.32■■■□□ 2.28
CTDNEP1-201ENST00000318988 SPOUT1Q5T280 376 aaKnown RBP29.32■■■□□ 2.28
CTDNEP1-201ENST00000318988 DPH6Q7L8W6 267 aa29.32■■■□□ 2.28
CTDNEP1-201ENST00000318988 TMCO2Q7Z6W1 182 aaPredicted RBP29.32■■■□□ 2.28
CTDNEP1-201ENST00000318988 TOP6BLQ8N6T0 577 aa29.32■■■□□ 2.28
CTDNEP1-201ENST00000318988 RBBP8NLQ8NC74 664 aaPredicted RBP29.32■■■□□ 2.28
CTDNEP1-201ENST00000318988 C3orf58Q8NDZ4 430 aa29.32■■■□□ 2.28
CTDNEP1-201ENST00000318988 SENP8Q96LD8 212 aa29.32■■■□□ 2.28
CTDNEP1-201ENST00000318988 DNAI2Q9GZS0 605 aa29.32■■■□□ 2.28
CTDNEP1-201ENST00000318988 KCNF1Q9H3M0 494 aa29.32■■■□□ 2.28
CTDNEP1-201ENST00000318988 PRG3Q9Y2Y8 225 aaPredicted RBP29.32■■■□□ 2.28
CTDNEP1-201ENST00000318988 PRKCIP41743 596 aa29.31■■■□□ 2.28
CTDNEP1-201ENST00000318988 CCZ1BP86790 482 aa29.31■■■□□ 2.28
CTDNEP1-201ENST00000318988 CCZ1P86791 482 aaPredicted RBP29.31■■■□□ 2.28
CTDNEP1-201ENST00000318988 PTK2Q05397 1052 aa29.31■■■□□ 2.28
CTDNEP1-201ENST00000318988 BTG3Q14201 252 aaPredicted RBP29.31■■■□□ 2.28
CTDNEP1-201ENST00000318988 CMTR2Q8IYT2 770 aaKnown RBP29.31■■■□□ 2.28
CTDNEP1-201ENST00000318988 HASPINQ8TF76 798 aa29.31■■■□□ 2.28
CTDNEP1-201ENST00000318988 ZNF689Q96CS4 500 aaPredicted RBP29.31■■■□□ 2.28
CTDNEP1-201ENST00000318988 CCDC42Q96M95 316 aa29.31■■■□□ 2.28
CTDNEP1-201ENST00000318988 CHP1Q99653 195 aa29.31■■■□□ 2.28
CTDNEP1-201ENST00000318988 SDCBP2Q9H190 292 aa29.31■■■□□ 2.28
CTDNEP1-201ENST00000318988 ARHGAP6O43182 974 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 B4GALT3O60512 393 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 TADA2AO75478 443 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 PDE6CP51160 858 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 VPS36Q86VN1 386 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 TMEM139Q8IV31 216 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 UBR7Q8N806 425 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 SLC9A7Q96T83 725 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 SNX25Q9H3E2 840 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 HAUS4Q9H6D7 363 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 BARX2Q9UMQ3 279 aaPredicted RBP29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 CNTN6Q9UQ52 1028 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.3■■■□□ 2.281e-7■□□□□ 8.6
CTDNEP1-201ENST00000318988 TMEM189-UBE2V1I3L0A0 370 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 NRP1O14786 923 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 TRAPPC3O43617 180 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 KIF4AO95239 1232 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 ODC1P11926 461 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 ALDH7A1P49419 539 aaKnown RBP29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 SOWAHAQ2M3V2 549 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 PHOSPHO2Q8TCD6 241 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 NHEJ1Q9H9Q4 299 aaPredicted RBP29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 CXXC1Q9P0U4 656 aaPredicted RBP29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 ARHGAP20Q9P2F6 1191 aa29.3■■■□□ 2.28
CTDNEP1-201ENST00000318988 SCN1AP35498 2009 aa29.29■■■□□ 2.28
CTDNEP1-201ENST00000318988 TACC1O75410 805 aa29.29■■■□□ 2.28
CTDNEP1-201ENST00000318988 FAM163BP0C2L3 166 aa29.29■■■□□ 2.28
CTDNEP1-201ENST00000318988 CLCN1P35523 988 aa29.29■■■□□ 2.28
CTDNEP1-201ENST00000318988 AARSP49588 968 aaKnown RBP eCLIP29.29■■■□□ 2.28
CTDNEP1-201ENST00000318988 TIGD5Q53EQ6 642 aa29.29■■■□□ 2.28
CTDNEP1-201ENST00000318988 ZNF394Q53GI3 561 aa29.29■■■□□ 2.28
CTDNEP1-201ENST00000318988 HGSNATQ68CP4 663 aa29.29■■■□□ 2.28
CTDNEP1-201ENST00000318988 METTL23Q86XA0 190 aa29.29■■■□□ 2.28
CTDNEP1-201ENST00000318988 ADGRF2Q8IZF7 708 aa29.29■■■□□ 2.28
CTDNEP1-201ENST00000318988 TMEM86AQ8N2M4 240 aa29.29■■■□□ 2.28
CTDNEP1-201ENST00000318988 OR6B3Q8NGW1 331 aa29.29■■■□□ 2.28
CTDNEP1-201ENST00000318988 MRPL45Q9BRJ2 306 aaKnown RBP29.29■■■□□ 2.28
CTDNEP1-201ENST00000318988 L1RE1Q9UN81 338 aa29.29■■■□□ 2.28
CTDNEP1-201ENST00000318988 SSU72P8A0A1W2PR75 194 aa29.28■■■□□ 2.28
CTDNEP1-201ENST00000318988 SOWAHDA6NJG2 315 aa29.28■■■□□ 2.28
CTDNEP1-201ENST00000318988 CILPO75339 1184 aa29.28■■■□□ 2.28
CTDNEP1-201ENST00000318988 GJB5O95377 273 aa29.28■■■□□ 2.28
CTDNEP1-201ENST00000318988 IGFBP6P24592 240 aaPredicted RBP29.28■■■□□ 2.28
CTDNEP1-201ENST00000318988 CYLC1P35663 651 aaPredicted RBP29.28■■■□□ 2.28
CTDNEP1-201ENST00000318988 EIF4A3P38919 411 aaKnown RBP29.28■■■□□ 2.28
CTDNEP1-201ENST00000318988 SLC11A1P49279 550 aa29.28■■■□□ 2.28
CTDNEP1-201ENST00000318988 INCA1Q0VD86 236 aa29.28■■■□□ 2.28
CTDNEP1-201ENST00000318988 SLC47A2Q86VL8 602 aa29.28■■■□□ 2.28
CTDNEP1-201ENST00000318988 CCDC170Q8IYT3 715 aa29.28■■■□□ 2.28
CTDNEP1-201ENST00000318988 PUF60Q9UHX1 559 aaKnown RBP29.28■■■□□ 2.28
CTDNEP1-201ENST00000318988 DSEQ9UL01 958 aa29.28■■■□□ 2.28
CTDNEP1-201ENST00000318988 CARNS1A5YM72 827 aa29.27■■■□□ 2.28
CTDNEP1-201ENST00000318988 AKR1B10O60218 316 aa29.27■■■□□ 2.28
CTDNEP1-201ENST00000318988 GALTP07902 379 aa29.27■■■□□ 2.28
CTDNEP1-201ENST00000318988 PLEKP08567 350 aaPredicted RBP29.27■■■□□ 2.28
CTDNEP1-201ENST00000318988 ATP2A2P16615 1042 aaKnown RBP29.27■■■□□ 2.28
CTDNEP1-201ENST00000318988 GNL1P36915 607 aaPredicted RBP29.27■■■□□ 2.28
CTDNEP1-201ENST00000318988 BRCC3P46736 316 aa29.27■■■□□ 2.28
CTDNEP1-201ENST00000318988 NDST1P52848 882 aa29.27■■■□□ 2.28
CTDNEP1-201ENST00000318988 BCAR1P56945 870 aa29.27■■■□□ 2.28
CTDNEP1-201ENST00000318988 PDCL2Q8N4E4 241 aa29.27■■■□□ 2.28
CTDNEP1-201ENST00000318988 SUSD3Q96L08 255 aa29.27■■■□□ 2.28
CTDNEP1-201ENST00000318988 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP29.27■■■□□ 2.28
CTDNEP1-201ENST00000318988 NT5C1AQ9BXI3 368 aa29.27■■■□□ 2.28
CTDNEP1-201ENST00000318988 HCSTQ9UBK5 93 aa29.27■■■□□ 2.28
CTDNEP1-201ENST00000318988 CYP11B1P15538 503 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms