RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 ATAT1Q5SQI0 421 aa13.96□□□□□ -0.17
NBPF3-201ENST00000318220 RD3Q7Z3Z2 195 aa13.96□□□□□ -0.17
NBPF3-201ENST00000318220 SENP8Q96LD8 212 aa13.96□□□□□ -0.17
NBPF3-201ENST00000318220 TMEM8AQ9HCN3 771 aa13.96□□□□□ -0.17
NBPF3-201ENST00000318220 COL14A1Q05707 1796 aaKnown RBP13.96□□□□□ -0.17
NBPF3-201ENST00000318220 PODXLO00592 558 aa13.96□□□□□ -0.17
NBPF3-201ENST00000318220 GMNNO75496 209 aa13.96□□□□□ -0.17
NBPF3-201ENST00000318220 BDNFP23560 247 aa13.96□□□□□ -0.17
NBPF3-201ENST00000318220 PBX3P40426 434 aa13.96□□□□□ -0.17
NBPF3-201ENST00000318220 PLTPP55058 493 aa13.96□□□□□ -0.17
NBPF3-201ENST00000318220 MRPS25P82663 173 aaKnown RBP13.96□□□□□ -0.17
NBPF3-201ENST00000318220 TCEA2Q15560 299 aa13.96□□□□□ -0.17
NBPF3-201ENST00000318220 CCDC6Q16204 474 aa13.96□□□□□ -0.17
NBPF3-201ENST00000318220 PBXIP1Q96AQ6 731 aa13.96□□□□□ -0.17
NBPF3-201ENST00000318220 NDFIP2Q9NV92 336 aa13.96□□□□□ -0.17
NBPF3-201ENST00000318220 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.96□□□□□ -0.18
NBPF3-201ENST00000318220 ATP9BO43861 1147 aa13.96□□□□□ -0.18
NBPF3-201ENST00000318220 RNASEH1O60930 286 aaKnown RBP13.96□□□□□ -0.18
NBPF3-201ENST00000318220 CPLX4Q7Z7G2 160 aa13.96□□□□□ -0.18
NBPF3-201ENST00000318220 CD302Q8IX05 232 aa13.96□□□□□ -0.18
NBPF3-201ENST00000318220 RHOT2Q8IXI1 618 aa13.96□□□□□ -0.18
NBPF3-201ENST00000318220 ALDH8A1Q9H2A2 487 aaPredicted RBP13.96□□□□□ -0.18
NBPF3-201ENST00000318220 OLA1Q9NTK5 396 aaKnown RBP13.96□□□□□ -0.18
NBPF3-201ENST00000318220 CEP72Q9P209 647 aa13.96□□□□□ -0.18
NBPF3-201ENST00000318220 APEX2Q9UBZ4 518 aa13.96□□□□□ -0.18
NBPF3-201ENST00000318220 GOLGA8MH3BSY2 632 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 INHBAP08476 426 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 HOXA7P31268 230 aaPredicted RBP13.95□□□□□ -0.18
NBPF3-201ENST00000318220 PPM1AP35813 382 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 GIT2Q14161 759 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 Q4G0T1 1027 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 GJB7Q6PEY0 223 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 SLC35F6Q8N357 371 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 CEP120Q8N960 986 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 FAF2Q96CS3 445 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 AP1M1Q9BXS5 423 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 VPS28Q9UK41 221 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 SOWAHBA6NEL2 793 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 OPA1O60313 960 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 PCDH8O95206 1070 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 SLC10A3P09131 477 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 CLTBP09497 229 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 MTHFD1LQ6UB35 978 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 TAS1R2Q8TE23 839 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 C7orf43Q8WVR3 580 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 RSPH1Q8WYR4 309 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 SMG7Q92540 1137 aaKnown RBP13.95□□□□□ -0.18
NBPF3-201ENST00000318220 CACYBPQ9HB71 228 aaKnown RBP13.95□□□□□ -0.18
NBPF3-201ENST00000318220 LZTS3O60299 673 aaPredicted RBP13.95□□□□□ -0.18
NBPF3-201ENST00000318220 ZNF500O60304 480 aaPredicted RBP13.95□□□□□ -0.18
NBPF3-201ENST00000318220 CA4P22748 312 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 TUFMP49411 452 aaKnown RBP13.95□□□□□ -0.18
NBPF3-201ENST00000318220 TRIM60Q495X7 471 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 NXNQ6DKJ4 435 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 MCEEQ96PE7 176 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 YIPF2Q9BWQ6 316 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 FAM105AQ9NUU6 356 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 ZNF214Q9UL59 606 aaPredicted RBP13.95□□□□□ -0.18
NBPF3-201ENST00000318220 SF3B1O75533 1304 aaKnown RBP eCLIP13.95□□□□□ -0.18
NBPF3-201ENST00000318220 ZMYND10O75800 440 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 NDUFA10O95299 355 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 LHX1P48742 406 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 C1orf131Q8NDD1 294 aaKnown RBP13.95□□□□□ -0.18
NBPF3-201ENST00000318220 MIR1-1HGQ9H1L0 117 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 SPG21Q9NZD8 308 aa13.95□□□□□ -0.18
NBPF3-201ENST00000318220 TTC26A0AVF1 554 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 LACTBL1A8MY62 500 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 DDHD2O94830 711 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 SERPINB6P35237 376 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 BRCC3P46736 316 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 IRX4P78413 519 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 LMNB2Q03252 620 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 NSUN2Q08J23 767 aaKnown RBP eCLIP13.94□□□□□ -0.18
NBPF3-201ENST00000318220 PSMD6Q15008 389 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 SMTNL2Q2TAL5 461 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 SDHAF4Q5VUM1 108 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 ADCK2Q7Z695 626 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 NPLOC4Q8TAT6 608 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 ZFP42Q96MM3 310 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 PNMA5Q96PV4 448 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 HACD3Q9P035 362 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 TLK1Q9UKI8 766 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 DSEQ9UL01 958 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 MOXD2PA6NHM9 499 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 B4GALT5O43286 388 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 GLUD1P00367 558 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 PHBP35232 272 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 HIC1Q14526 733 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 TMC5Q6UXY8 1006 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 ZNF720Q7Z2F6 126 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 AFAP1L2Q8N4X5 818 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 MRFAP1L1Q96HT8 127 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 RABEP2Q9H5N1 569 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 WDCPQ9H6R7 721 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 BRD9Q9H8M2 597 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 PRDM10Q9NQV6 1147 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 PCDHA13Q9Y5I0 950 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 SPATA31C2B4DYI2 1134 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 TISP43B9A030 160 aa13.94□□□□□ -0.18
NBPF3-201ENST00000318220 F8W8V4 182 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms