RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 FAM213AQ9BRX8 229 aa20.2■□□□□ 0.82
RTN4-201ENST00000317610 KIF9Q9HAQ2 790 aa20.2■□□□□ 0.82
RTN4-201ENST00000317610 SSU72Q9NP77 194 aaKnown RBP20.2■□□□□ 0.82
RTN4-201ENST00000317610 MAP3K20Q9NYL2 800 aaKnown RBP20.2■□□□□ 0.82
RTN4-201ENST00000317610 HAO1Q9UJM8 370 aa20.2■□□□□ 0.82
RTN4-201ENST00000317610 DNPEPQ9ULA0 475 aa20.2■□□□□ 0.82
RTN4-201ENST00000317610 DRG1Q9Y295 367 aaKnown RBP20.2■□□□□ 0.82
RTN4-201ENST00000317610 ATP9AO75110 1047 aa20.19■□□□□ 0.82
RTN4-201ENST00000317610 CFHP08603 1231 aa20.19■□□□□ 0.82
RTN4-201ENST00000317610 C1QBPQ07021 282 aaKnown RBP20.19■□□□□ 0.82
RTN4-201ENST00000317610 FASTKD3Q14CZ7 662 aaKnown RBP20.19■□□□□ 0.82
RTN4-201ENST00000317610 PSMD6Q15008 389 aa20.19■□□□□ 0.82
RTN4-201ENST00000317610 SLC1A5Q15758 541 aa20.19■□□□□ 0.82
RTN4-201ENST00000317610 CMPK2Q5EBM0 449 aa20.19■□□□□ 0.82
RTN4-201ENST00000317610 WDR44Q5JSH3 913 aa20.19■□□□□ 0.82
RTN4-201ENST00000317610 PPP1R2P3Q6NXS1 205 aa20.19■□□□□ 0.82
RTN4-201ENST00000317610 SLITRK1Q96PX8 696 aa20.19■□□□□ 0.82
RTN4-201ENST00000317610 GLIS2Q9BZE0 524 aaPredicted RBP20.19■□□□□ 0.82
RTN4-201ENST00000317610 CORO1CQ9ULV4 474 aaPredicted RBP20.19■□□□□ 0.82
RTN4-201ENST00000317610 POC1B-GALNT4F8VUJ3 575 aa20.19■□□□□ 0.82
RTN4-201ENST00000317610 TLR3O15455 904 aaKnown RBP20.19■□□□□ 0.82
RTN4-201ENST00000317610 HLA-DRAP01903 254 aa20.19■□□□□ 0.82
RTN4-201ENST00000317610 C4BPAP04003 597 aaKnown RBP20.19■□□□□ 0.82
RTN4-201ENST00000317610 RDM1Q8NG50 284 aa20.19■□□□□ 0.82
RTN4-201ENST00000317610 FEZF2Q8TBJ5 459 aa20.19■□□□□ 0.82
RTN4-201ENST00000317610 STK32AQ8WU08 396 aa20.19■□□□□ 0.82
RTN4-201ENST00000317610 NAF1Q96HR8 494 aaKnown RBP20.19■□□□□ 0.82
RTN4-201ENST00000317610 FAM84AQ96KN4 292 aa20.19■□□□□ 0.82
RTN4-201ENST00000317610 CNTNAP1P78357 1384 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 SPDYE2BA6NHP3 402 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 HNRNPDLO14979 420 aaKnown RBP20.18■□□□□ 0.82
RTN4-201ENST00000317610 TBC1D12O60347 775 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 SPDYE6P0CI01 402 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 KRT15P19012 456 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 ARSEP51690 589 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 RTP1P59025 263 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 MCL1Q07820 350 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 PGM5Q15124 567 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 TAF11Q15544 211 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 WASHC2DQ5SRD0 308 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 RNASEH2BQ5TBB1 312 aaKnown RBP20.18■□□□□ 0.82
RTN4-201ENST00000317610 SEPT12Q8IYM1 358 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 ZNF398Q8TD17 642 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 TBC1D10AQ9BXI6 508 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 TLE6Q9H808 572 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 IP6K2Q9UHH9 426 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 CNTN6Q9UQ52 1028 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 USTQ9Y2C2 406 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 PSME4Q14997 1843 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 NDC80O14777 642 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 EXTL3O43909 919 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 TJP3O95049 919 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 ZSCAN5DPP0CG00 497 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 TPBGLP0DKB5 382 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 PTPN7P35236 360 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 ABL2P42684 1182 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 RASSF2P50749 326 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 SLC45A4Q5BKX6 768 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 CDCA2Q69YH5 1023 aaPredicted RBP20.18■□□□□ 0.82
RTN4-201ENST00000317610 TAS1R3Q7RTX0 852 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 C4orf33Q8N1A6 199 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 TAAR1Q96RJ0 339 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 FETUBQ9UGM5 382 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 SHOC2Q9UQ13 582 aa20.18■□□□□ 0.82
RTN4-201ENST00000317610 C2CD2LO14523 706 aa20.17■□□□□ 0.82
RTN4-201ENST00000317610 ZBED4O75132 1171 aa20.17■□□□□ 0.82
RTN4-201ENST00000317610 GM2AP17900 193 aa20.17■□□□□ 0.82
RTN4-201ENST00000317610 CA4P22748 312 aa20.17■□□□□ 0.82
RTN4-201ENST00000317610 GJC1P36383 396 aa20.17■□□□□ 0.82
RTN4-201ENST00000317610 CUL2Q13617 745 aa20.17■□□□□ 0.82
RTN4-201ENST00000317610 OASLQ15646 514 aaKnown RBP20.17■□□□□ 0.82
RTN4-201ENST00000317610 ZC3H12AQ5D1E8 599 aaKnown RBP20.17■□□□□ 0.82
RTN4-201ENST00000317610 EFHC2Q5JST6 749 aa20.17■□□□□ 0.82
RTN4-201ENST00000317610 LRRC38Q5VT99 294 aa20.17■□□□□ 0.82
RTN4-201ENST00000317610 TDRD10Q5VZ19 366 aaKnown RBP20.17■□□□□ 0.82
RTN4-201ENST00000317610 TRMT1LQ7Z2T5 733 aaKnown RBP20.17■□□□□ 0.82
RTN4-201ENST00000317610 TEX9Q8N6V9 391 aa20.17■□□□□ 0.82
RTN4-201ENST00000317610 KCNV2Q8TDN2 545 aa20.17■□□□□ 0.82
RTN4-201ENST00000317610 SENP7Q9BQF6 1050 aa20.17■□□□□ 0.82
RTN4-201ENST00000317610 PDLIM7Q9NR12 457 aa20.17■□□□□ 0.82
RTN4-201ENST00000317610 PARVAQ9NVD7 372 aa20.17■□□□□ 0.82
RTN4-201ENST00000317610 PSMC3IPQ9P2W1 217 aaPredicted RBP20.17■□□□□ 0.82
RTN4-201ENST00000317610 ZNF148Q9UQR1 794 aa20.17■□□□□ 0.82
RTN4-201ENST00000317610 KRT10P13645 584 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 EIF2AK2P19525 551 aaKnown RBP20.16■□□□□ 0.82
RTN4-201ENST00000317610 GRIK3Q13003 919 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 GPS1Q13098 491 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 MFSD7Q6UXD7 560 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 OTOAQ7RTW8 1153 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 LONP2Q86WA8 852 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 PASD1Q8IV76 773 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 VPS37BQ9H9H4 285 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 ZNF70Q9UC06 446 aaPredicted RBP20.16■□□□□ 0.82
RTN4-201ENST00000317610 LNPEPQ9UIQ6 1025 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 CLRN2A0PK11 232 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 A6NHS1 94 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 STBD1O95210 358 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 VNN1O95497 513 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 GNA15P30679 374 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 SSR1P43307 286 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms