RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 ZNF507Q8TCN5 953 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 MTA3Q9BTC8 594 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 VPS11Q9H270 941 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 FBXO10Q9UK96 956 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 ARHGAP42A6NI28 874 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 TCP1P17987 556 aaKnown RBP9.48□□□□□ -0.89
CTC1-201ENST00000315684 SLC9A1P19634 815 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 DHX40Q8IX18 779 aaKnown RBP9.48□□□□□ -0.89
CTC1-201ENST00000315684 IPMKQ8NFU5 416 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 CINPQ9BW66 212 aaPredicted RBP9.48□□□□□ -0.89
CTC1-201ENST00000315684 TRMT13Q9NUP7 481 aaKnown RBP9.48□□□□□ -0.89
CTC1-201ENST00000315684 RIC1Q4ADV7 1423 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 MROH7Q68CQ1 1323 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 PDXKO00764 312 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 TRDMT1O14717 391 aaKnown RBP9.48□□□□□ -0.89
CTC1-201ENST00000315684 CCL16O15467 120 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 PNPLA4P41247 253 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 IMPG1Q17R60 797 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 KLC3Q6P597 504 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 ADAM32Q8TC27 787 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 CYFIP2Q96F07 1278 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 PPP1R13BQ96KQ4 1090 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 VPS28Q9UK41 221 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 TBC1D3BA6NDS4 549 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 PODXLO00592 558 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 SEPT4O43236 478 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 GPS1Q13098 491 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 ANKRD20A3Q5VUR7 823 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 KIAA1324Q6UXG2 1013 aaKnown RBP9.48□□□□□ -0.89
CTC1-201ENST00000315684 SYT2Q8N9I0 419 aaPredicted RBP9.48□□□□□ -0.89
CTC1-201ENST00000315684 C1orf131Q8NDD1 294 aaKnown RBP9.48□□□□□ -0.89
CTC1-201ENST00000315684 FAM136AQ96C01 138 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 FBXL5Q9UKA1 691 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 MRPS23Q9Y3D9 190 aaKnown RBP9.48□□□□□ -0.89
CTC1-201ENST00000315684 RIPK3Q9Y572 518 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 CCDC195A0A1B0GUA6 201 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 CBX4O00257 560 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 BDNFP23560 247 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 RCN2Q14257 317 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 FRMD5Q7Z6J6 570 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 FAM124AQ86V42 546 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 GUF1Q8N442 669 aaKnown RBP9.48□□□□□ -0.89
CTC1-201ENST00000315684 ULK4Q96C45 1275 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 THOC1Q96FV9 657 aaKnown RBP9.48□□□□□ -0.89
CTC1-201ENST00000315684 SCUBE2Q9NQ36 999 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 LGALS16A8MUM7 142 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 ZRANB3Q5FWF4 1079 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 TAF2Q6P1X5 1199 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 TFAP2DQ7Z6R9 452 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 FMR1NBQ8N0W7 255 aaPredicted RBP9.48□□□□□ -0.89
CTC1-201ENST00000315684 PPP1R36Q96LQ0 422 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 APEX2Q9UBZ4 518 aa9.48□□□□□ -0.89
CTC1-201ENST00000315684 COL14A1Q05707 1796 aaKnown RBP9.48□□□□□ -0.89
CTC1-201ENST00000315684 NDUFS2O75306 463 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 CABYRO75952 493 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 TGFB3P10600 412 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 CCDC130P13994 396 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 CCND3P30281 292 aaPredicted RBP9.47□□□□□ -0.89
CTC1-201ENST00000315684 PAPOLAP51003 745 aaKnown RBP9.47□□□□□ -0.89
CTC1-201ENST00000315684 MYL6P60660 151 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 DR1Q01658 176 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 MTMR3Q13615 1198 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 CCDC60Q8IWA6 550 aaPredicted RBP9.47□□□□□ -0.89
CTC1-201ENST00000315684 TTC39CQ8N584 583 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 BBOF1Q8ND07 529 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 AFAP1L1Q8TED9 768 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 MCUR1Q96AQ8 359 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 RBM41Q96IZ5 413 aaKnown RBP9.47□□□□□ -0.89
CTC1-201ENST00000315684 ST3GAL5Q9UNP4 418 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 LTN1O94822 1766 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 EIF3EP60228 445 aaKnown RBP9.47□□□□□ -0.89
CTC1-201ENST00000315684 RPL10AP62906 217 aaKnown RBP9.47□□□□□ -0.89
CTC1-201ENST00000315684 KIAA0319LQ8IZA0 1049 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 NAT16Q8N8M0 369 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 ATP6V0D2Q8N8Y2 350 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 AGR3Q8TD06 166 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 ADGRB2O60241 1585 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 LACTBL1A8MY62 500 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 CDH8P55286 799 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 ASPHQ12797 758 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 ARFGAP2Q8N6H7 521 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 STMN2Q93045 179 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 BTBD6Q96KE9 485 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 DDX20Q9UHI6 824 aaKnown RBP9.47□□□□□ -0.89
CTC1-201ENST00000315684 DPP7Q9UHL4 492 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 NDRG2Q9UN36 371 aaKnown RBP9.47□□□□□ -0.89
CTC1-201ENST00000315684 GPR25O00155 361 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 GAS2O43903 313 aaKnown RBP9.47□□□□□ -0.89
CTC1-201ENST00000315684 RECQL4O94761 1208 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 MAP4P27816 1152 aaKnown RBP9.47□□□□□ -0.89
CTC1-201ENST00000315684 EPHB2P29323 1055 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 TFDP2Q14188 446 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 ZKSCAN8Q15776 578 aaPredicted RBP9.47□□□□□ -0.89
CTC1-201ENST00000315684 GIMAP7Q8NHV1 300 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 KAT2BQ92831 832 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 PAWRQ96IZ0 340 aaKnown RBP9.47□□□□□ -0.89
CTC1-201ENST00000315684 NIF3L1Q9GZT8 377 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 RANBP17Q9H2T7 1088 aaKnown RBP9.47□□□□□ -0.89
CTC1-201ENST00000315684 C11orf49Q9H6J7 331 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 FDPSP14324 419 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms