RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 NT5C1BQ96P26 610 aa13.57□□□□□ -0.24
CHMP2A-201ENST00000312547 C11orf84Q9BUA3 381 aaPredicted RBP13.57□□□□□ -0.24
CHMP2A-201ENST00000312547 HERC2P3Q9BVR0 1158 aa13.57□□□□□ -0.24
CHMP2A-201ENST00000312547 SDCBP2Q9H190 292 aa13.57□□□□□ -0.24
CHMP2A-201ENST00000312547 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.57□□□□□ -0.24
CHMP2A-201ENST00000312547 NXF1Q9UBU9 619 aaKnown RBP13.57□□□□□ -0.24
CHMP2A-201ENST00000312547 MTUS1Q9ULD2 1270 aa13.57□□□□□ -0.24
CHMP2A-201ENST00000312547 CHD9Q3L8U1 2897 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 H3BNC9 293 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 CBFA2T2O43439 604 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 TACC1O75410 805 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 NOL4O94818 638 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 ODC1P11926 461 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 P4HA1P13674 534 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 TKTP29401 623 aaKnown RBP13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 KLK7P49862 253 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 TNNC1P63316 161 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 GCNT1Q02742 428 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 KRT17Q04695 432 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 UBE3AQ05086 875 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 LRMPQ12912 555 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 CUL2Q13617 745 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 CAMK1Q14012 370 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 MRPL58Q14197 206 aaKnown RBP13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 KLHDC7AQ5VTJ3 777 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 FAM171A1Q5VUB5 890 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 WSCD1Q658N2 575 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 ARHGEF19Q8IW93 802 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 PDCL2Q8N4E4 241 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 UBR7Q8N806 425 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 FBXO22Q8NEZ5 403 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 SPATA18Q8TC71 538 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 KBTBD7Q8WVZ9 684 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 LSM14BQ9BX40 385 aaKnown RBP13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 ZBP1Q9H171 429 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 GANQ9H2C0 597 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 SMYD3Q9H7B4 428 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 CYP3A43Q9HB55 503 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 ALG13Q9NP73 1137 aaKnown RBP13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 APEX2Q9UBZ4 518 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 L1RE1Q9UN81 338 aa13.56□□□□□ -0.24
CHMP2A-201ENST00000312547 KIAA1671Q9BY89 1806 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 GBF1Q92538 1859 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 ARHGEF37A1IGU5 675 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 EPOPA6NHQ4 379 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 GABRDO14764 452 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 EPHB6O15197 1021 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 GRM6O15303 877 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 HUS1O60921 280 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 LILRB3O75022 631 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 OAZ2O95190 189 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 DNAJB1P25685 340 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 CDH8P55286 799 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 DSG1Q02413 1049 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 PTPN21Q16825 1174 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 USP41Q3LFD5 358 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 RTP2Q5QGT7 225 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 KIAA0319Q5VV43 1072 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 SMYD5Q6GMV2 418 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 GJB7Q6PEY0 223 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 OSTM1Q86WC4 334 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 TMEM86AQ8N2M4 240 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 APPL2Q8NEU8 664 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 ARNTL2Q8WYA1 636 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 PIK3R5Q8WYR1 880 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 KAT5Q92993 513 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 B3GALT6Q96L58 329 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 KREMEN1Q96MU8 473 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 ARID3AQ99856 593 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 MRPL45Q9BRJ2 306 aaKnown RBP13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 TTPALQ9BTX7 342 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 NAA15Q9BXJ9 866 aaKnown RBP13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 FAM124BQ9H5Z6 455 aaPredicted RBP13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 ZNF576Q9H609 170 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 CERS4Q9HA82 394 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 FBXL5Q9UKA1 691 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 AJAP1Q9UKB5 411 aaPredicted RBP13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 DSEQ9UL01 958 aa13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 TIMM13Q9Y5L4 95 aaPredicted RBP13.55□□□□□ -0.24
CHMP2A-201ENST00000312547 SCN1AP35498 2009 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 PRUNE2Q8WUY3 3088 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 GOLGA6L3A6NEY3 463 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 DLL1O00548 723 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 FSCN2O14926 492 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 TBC1D4O60343 1298 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 LPXNO60711 386 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 TPM3P06753 285 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 WEE2P0C1S8 567 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 CTSAP10619 480 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 UCHL3P15374 230 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 ACO1P21399 889 aaKnown RBP13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 RFX1P22670 979 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 WARSP23381 471 aaKnown RBP13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 TBXAS1P24557 533 aaPredicted RBP13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 RAP1GAPP47736 663 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 ZNF75DP51815 510 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 INCA1Q0VD86 236 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 GPM6BQ13491 265 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 VARS2Q5ST30 1063 aaKnown RBP13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 IQCEQ6IPM2 695 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms