RNA–Protein interactions for RNA: ENST00000309890.11

ATP2A3-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-201ENST00000309890 PCDHGC5Q9Y5F6 944 aa18.83■□□□□ 0.61
ATP2A3-201ENST00000309890 GHRP10912 638 aa18.83■□□□□ 0.6
ATP2A3-201ENST00000309890 HMGCS2P54868 508 aa18.83■□□□□ 0.6
ATP2A3-201ENST00000309890 RBP5P82980 135 aa18.83■□□□□ 0.6
ATP2A3-201ENST00000309890 ZNF844Q08AG5 666 aa18.83■□□□□ 0.6
ATP2A3-201ENST00000309890 SLC30A9Q6PML9 568 aa18.83■□□□□ 0.6
ATP2A3-201ENST00000309890 LCA5Q86VQ0 697 aa18.83■□□□□ 0.6
ATP2A3-201ENST00000309890 SEMA4AQ9H3S1 761 aa18.83■□□□□ 0.6
ATP2A3-201ENST00000309890 PCMTD2Q9NV79 361 aa18.83■□□□□ 0.6
ATP2A3-201ENST00000309890 PDE2AO00408 941 aaPredicted RBP18.83■□□□□ 0.6
ATP2A3-201ENST00000309890 EEF1DP29692 281 aaKnown RBP18.83■□□□□ 0.6
ATP2A3-201ENST00000309890 SYCP2LQ5T4T6 812 aa18.83■□□□□ 0.6
ATP2A3-201ENST00000309890 SEPT1Q8WYJ6 367 aa18.83■□□□□ 0.6
ATP2A3-201ENST00000309890 ZNF560Q96MR9 790 aa18.83■□□□□ 0.6
ATP2A3-201ENST00000309890 KRT4P19013 534 aa18.83■□□□□ 0.6
ATP2A3-201ENST00000309890 KCNA3P22001 575 aa18.83■□□□□ 0.6
ATP2A3-201ENST00000309890 KIF22Q14807 665 aa18.83■□□□□ 0.6
ATP2A3-201ENST00000309890 CACYBPQ9HB71 228 aaKnown RBP18.83■□□□□ 0.6
ATP2A3-201ENST00000309890 ERFP50548 548 aa18.82■□□□□ 0.6
ATP2A3-201ENST00000309890 CUL2Q13617 745 aa18.82■□□□□ 0.6
ATP2A3-201ENST00000309890 MDH1BQ5I0G3 518 aa18.82■□□□□ 0.6
ATP2A3-201ENST00000309890 E2F7Q96AV8 911 aa18.82■□□□□ 0.6
ATP2A3-201ENST00000309890 TNIP3Q96KP6 325 aa18.82■□□□□ 0.6
ATP2A3-201ENST00000309890 ZNF70Q9UC06 446 aaPredicted RBP18.82■□□□□ 0.6
ATP2A3-201ENST00000309890 STIP1P31948 543 aaKnown RBP18.82■□□□□ 0.6
ATP2A3-201ENST00000309890 FASTKD1Q53R41 847 aaKnown RBP18.82■□□□□ 0.6
ATP2A3-201ENST00000309890 TSEN2Q8NCE0 465 aaKnown RBP18.82■□□□□ 0.6
ATP2A3-201ENST00000309890 SLC35C1Q96A29 364 aa18.82■□□□□ 0.6
ATP2A3-201ENST00000309890 ZBTB18Q99592 522 aa18.82■□□□□ 0.6
ATP2A3-201ENST00000309890 TARS2Q9BW92 718 aaKnown RBP18.82■□□□□ 0.6
ATP2A3-201ENST00000309890 POLRMTO00411 1230 aaKnown RBP18.82■□□□□ 0.6
ATP2A3-201ENST00000309890 PDCD2Q16342 344 aaPredicted RBP18.82■□□□□ 0.6
ATP2A3-201ENST00000309890 APOBEC3FQ8IUX4 373 aaKnown RBP18.82■□□□□ 0.6
ATP2A3-201ENST00000309890 KCNMA1Q12791 1236 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 TTC39BQ5VTQ0 682 aaPredicted RBP18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 ZNF772Q68DY9 489 aaPredicted RBP18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 TWF2Q6IBS0 349 aaKnown RBP18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 TMEM154Q6P9G4 183 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 C4orf22Q6V702 233 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 NLRP9Q7RTR0 991 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 NDUFAF2Q8N183 169 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 AGBL1Q96MI9 1066 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 GRID1Q9ULK0 1009 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 A0A0U1RQJ8 604 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 VHLP40337 213 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 NME3Q13232 169 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 SMAD1Q15797 465 aaKnown RBP18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 TKFCQ3LXA3 575 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 FOXR1Q6PIV2 292 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 AGR3Q8TD06 166 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 GMCL1Q96IK5 515 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 LBHD1Q9BQE6 289 aaPredicted RBP18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 KRT82Q9NSB4 513 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 ATP9BO43861 1147 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 TARSP26639 723 aaKnown RBP18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 WDR59Q6PJI9 974 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 TEX2Q8IWB9 1127 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 TMC2Q8TDI7 906 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 CMTM5Q96DZ9 223 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 EHD4Q9H223 541 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 AP3B1O00203 1094 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 UBOX5O94941 541 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 CNGA3Q16281 694 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 SLC20A1Q8WUM9 679 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 ATXN7L3BQ96GX2 97 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 FRMD8P1Q9BZ68 369 aaPredicted RBP18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 ING2Q9H160 280 aa18.81■□□□□ 0.6
ATP2A3-201ENST00000309890 PPARGP37231 505 aaPredicted RBP18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 MTM1Q13496 603 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 SMTNL2Q2TAL5 461 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 DAB2IPQ5VWQ8 1189 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 LRRC6Q86X45 466 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 SPATA20Q8TB22 786 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 KIFC3Q9BVG8 833 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 RRM1P23921 792 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 CTCFP49711 727 aaPredicted RBP18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 CRYMQ14894 314 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 VPS72Q15906 364 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 CCNG2Q16589 344 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 POTEAQ6S8J7 498 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 NT5DC3Q86UY8 548 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 NUDT12Q9BQG2 462 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 DDX3XO00571 662 aaKnown RBP eCLIP18.8■□□□□ 0.61e-8■■□□□ 12.6
ATP2A3-201ENST00000309890 CYTH3O43739 400 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 RGS7P49802 495 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 PSMC6P62333 389 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 RPS6P62753 249 aaKnown RBP18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 MCL1Q07820 350 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 NFIAQ12857 509 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 ZBTB17Q13105 803 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 TRIM49D1C9J1S8 452 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 KLRC4O43908 158 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 PROSCO94903 275 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 ANP32DO95626 131 aa18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 ARID3BQ8IVW6 561 aaPredicted RBP18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 C1orf131Q8NDD1 294 aaKnown RBP18.8■□□□□ 0.6
ATP2A3-201ENST00000309890 ENO4A6NNW6 628 aa18.79■□□□□ 0.6
ATP2A3-201ENST00000309890 SYF2O95926 243 aaKnown RBP18.79■□□□□ 0.6
ATP2A3-201ENST00000309890 GARTP22102 1010 aa18.79■□□□□ 0.6
ATP2A3-201ENST00000309890 TNFRSF8P28908 595 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms