RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 TRIM49BA6NDI0 452 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 TRIM49D1C9J1S8 452 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 ARHGEF7Q14155 803 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 DDX50Q9BQ39 737 aaKnown RBP13.97□□□□□ -0.17
TRIM56-201ENST00000306085 EIF2AK2P19525 551 aaKnown RBP13.97□□□□□ -0.17
TRIM56-201ENST00000306085 SERPINB5P36952 375 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 SRP54P61011 504 aaKnown RBP13.97□□□□□ -0.17
TRIM56-201ENST00000306085 TRAF2Q12933 501 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 CARD14Q9BXL6 1004 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 VAV3Q9UKW4 847 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 AP3D1O14617 1153 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 MMP1P03956 469 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 DDX39BQ13838 428 aaKnown RBP13.97□□□□□ -0.17
TRIM56-201ENST00000306085 OASLQ15646 514 aaKnown RBP13.97□□□□□ -0.17
TRIM56-201ENST00000306085 MAP10Q9P2G4 905 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 C1orf232A0A0U1RR37 186 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 BTN3A2P78410 334 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 ZNF544Q6NX49 715 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 CDC73Q6P1J9 531 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 RHOT1Q8IXI2 618 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 NACC2Q96BF6 587 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 SULT1E1P49888 294 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 ARF3P61204 181 aaPredicted RBP13.97□□□□□ -0.17
TRIM56-201ENST00000306085 ARF1P84077 181 aaKnown RBP13.97□□□□□ -0.17
TRIM56-201ENST00000306085 EDRF1Q3B7T1 1238 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 TRIM66O15016 1216 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 ATP1A3P13637 1013 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 HNMTP50135 292 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 TRAP1Q12931 704 aaKnown RBP13.97□□□□□ -0.17
TRIM56-201ENST00000306085 MAGEB10Q96LZ2 347 aaPredicted RBP13.97□□□□□ -0.17
TRIM56-201ENST00000306085 MTO1Q9Y2Z2 717 aaKnown RBP13.97□□□□□ -0.17
TRIM56-201ENST00000306085 COPAP53621 1224 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 PHACTR1Q9C0D0 580 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 IDH3BO43837 385 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 CNOT3O75175 753 aaKnown RBP13.96□□□□□ -0.17
TRIM56-201ENST00000306085 PTPN1P18031 435 aaKnown RBP13.96□□□□□ -0.17
TRIM56-201ENST00000306085 PTK7Q13308 1070 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 OLFML2AQ68BL7 652 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 SHCBP1LQ9BZQ2 653 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 POLR1DQ9Y2S0 133 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 C3orf70A6NLC5 250 aaPredicted RBP13.96□□□□□ -0.17
TRIM56-201ENST00000306085 CPB1P15086 417 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 CCNE1P24864 410 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 MKRN4PQ13434 485 aaPredicted RBP13.96□□□□□ -0.17
TRIM56-201ENST00000306085 SLC13A5Q86YT5 568 aaPredicted RBP13.96□□□□□ -0.17
TRIM56-201ENST00000306085 RNF26Q9BY78 433 aaPredicted RBP13.96□□□□□ -0.17
TRIM56-201ENST00000306085 PARVAQ9NVD7 372 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 LBPP18428 481 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 ITGB3BPQ13352 177 aaPredicted RBP13.96□□□□□ -0.17
TRIM56-201ENST00000306085 FBXO42Q6P3S6 717 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 CDK17Q00537 523 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 STAT4Q14765 748 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 SEPT1Q8WYJ6 367 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 BHMT2Q9H2M3 363 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 ATP10DQ9P241 1426 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 NEURL1BA8MQ27 555 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 MAPK6Q16659 721 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 DDR2Q16832 855 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 DIDO1Q9BTC0 2240 aaKnown RBP13.96□□□□□ -0.17
TRIM56-201ENST00000306085 SEMA3DO95025 777 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 SCP2P22307 547 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 MDH1P40925 334 aaKnown RBP13.96□□□□□ -0.17
TRIM56-201ENST00000306085 OLFML1Q6UWY5 402 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 LEMD2Q8NC56 503 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 SCFD2Q8WU76 684 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 IL1RAPL1Q9NZN1 696 aa13.96□□□□□ -0.17
TRIM56-201ENST00000306085 PTPN7P35236 360 aa13.96□□□□□ -0.18
TRIM56-201ENST00000306085 STARP49675 285 aa13.96□□□□□ -0.18
TRIM56-201ENST00000306085 MCCD1P59942 119 aaPredicted RBP13.96□□□□□ -0.18
TRIM56-201ENST00000306085 CYP4Z1Q86W10 505 aa13.96□□□□□ -0.18
TRIM56-201ENST00000306085 ARL10Q8N8L6 244 aa13.96□□□□□ -0.18
TRIM56-201ENST00000306085 RIC8BQ9NVN3 520 aa13.96□□□□□ -0.18
TRIM56-201ENST00000306085 H7C0S8 307 aa13.96□□□□□ -0.18
TRIM56-201ENST00000306085 GNAT1P11488 350 aa13.96□□□□□ -0.18
TRIM56-201ENST00000306085 GSSP48637 474 aa13.96□□□□□ -0.18
TRIM56-201ENST00000306085 DHX34Q14147 1143 aaKnown RBP13.96□□□□□ -0.18
TRIM56-201ENST00000306085 NANOGNBQ7Z5D8 188 aa13.96□□□□□ -0.18
TRIM56-201ENST00000306085 PIF1Q9H611 641 aa13.96□□□□□ -0.18
TRIM56-201ENST00000306085 ENTPD7Q9NQZ7 604 aa13.96□□□□□ -0.18
TRIM56-201ENST00000306085 QARSP47897 775 aaKnown RBP13.95□□□□□ -0.18
TRIM56-201ENST00000306085 RGS4P49798 205 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 SPANXN2Q5MJ10 180 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 SH2D3CQ8N5H7 860 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 SNX13Q9Y5W8 968 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 ECDO95905 644 aaPredicted RBP13.95□□□□□ -0.18
TRIM56-201ENST00000306085 BCL10O95999 233 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 CLTBP09497 229 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 NME5P56597 212 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 TSNQ15631 228 aaKnown RBP13.95□□□□□ -0.18
TRIM56-201ENST00000306085 TTC39BQ5VTQ0 682 aaPredicted RBP13.95□□□□□ -0.18
TRIM56-201ENST00000306085 CACHD1Q5VU97 1274 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 USP17L2Q6R6M4 530 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 MPP4Q96JB8 637 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 CYP39A1Q9NYL5 469 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 GTF2E2P29084 291 aaKnown RBP13.95□□□□□ -0.18
TRIM56-201ENST00000306085 ZNF200P98182 395 aaPredicted RBP13.95□□□□□ -0.18
TRIM56-201ENST00000306085 VEPH1Q14D04 833 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 TCEAL5Q5H9L2 206 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 PCP11498 1178 aaKnown RBP13.95□□□□□ -0.18
TRIM56-201ENST00000306085 ST8SIA6P61647 398 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms