RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 MUC3BQ9H195 1237 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 INTS13Q9NVM9 706 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 TNFSF13BQ9Y275 285 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 CPP00450 1065 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 HSPA1AP0DMV8 641 aaKnown RBP9.78□□□□□ -0.84
PTPRE-202ENST00000306042 HSPA1BP0DMV9 641 aaKnown RBP9.78□□□□□ -0.84
PTPRE-202ENST00000306042 VDRP11473 427 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 SLC11A2P49281 568 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 C1QTNF8P60827 252 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 MTMR3Q13615 1198 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 CAPSQ13938 189 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 MDH1BQ5I0G3 518 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 MIB1Q86YT6 1006 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 BRSK2Q8IWQ3 736 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 AFAP1L2Q8N4X5 818 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 CCDC110Q8TBZ0 833 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 EFCAB8A8MWE9 144 aa9.77□□□□□ -0.84
PTPRE-202ENST00000306042 DFFAO00273 331 aa9.77□□□□□ -0.84
PTPRE-202ENST00000306042 SLC2A3P11169 496 aa9.77□□□□□ -0.84
PTPRE-202ENST00000306042 KCNA2P16389 499 aa9.77□□□□□ -0.84
PTPRE-202ENST00000306042 PTENP60484 403 aa9.77□□□□□ -0.84
PTPRE-202ENST00000306042 ZBTB16Q05516 673 aa9.77□□□□□ -0.84
PTPRE-202ENST00000306042 ORC1Q13415 861 aa9.77□□□□□ -0.84
PTPRE-202ENST00000306042 KRT33BQ14525 404 aa9.77□□□□□ -0.84
PTPRE-202ENST00000306042 DENND2CQ68D51 928 aa9.77□□□□□ -0.84
PTPRE-202ENST00000306042 C1orf186Q6ZWK4 172 aa9.77□□□□□ -0.84
PTPRE-202ENST00000306042 ZNF677Q86XU0 584 aa9.77□□□□□ -0.84
PTPRE-202ENST00000306042 RHOT1Q8IXI2 618 aa9.77□□□□□ -0.84
PTPRE-202ENST00000306042 UROC1Q96N76 676 aa9.77□□□□□ -0.84
PTPRE-202ENST00000306042 HEMGNQ9BXL5 484 aa9.77□□□□□ -0.84
PTPRE-202ENST00000306042 KRT82Q9NSB4 513 aa9.77□□□□□ -0.84
PTPRE-202ENST00000306042 DDX56Q9NY93 547 aaKnown RBP9.77□□□□□ -0.84
PTPRE-202ENST00000306042 HES2Q9Y543 173 aa9.77□□□□□ -0.84
PTPRE-202ENST00000306042 KCNA4P22459 653 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 PMLP29590 882 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 TUFMP49411 452 aaKnown RBP9.77□□□□□ -0.85
PTPRE-202ENST00000306042 SLC12A3P55017 1021 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 FUT2Q10981 343 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 RAB30Q15771 203 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 JADE1Q6IE81 842 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 NPLOC4Q8TAT6 608 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 UCMAQ8WVF2 138 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 PAWRQ96IZ0 340 aaKnown RBP9.77□□□□□ -0.85
PTPRE-202ENST00000306042 PGLYRP2Q96PD5 576 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 HPSEQ9Y251 543 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 PPP1R3GB7ZBB8 358 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 ZFXP17010 805 aaPredicted RBP9.77□□□□□ -0.85
PTPRE-202ENST00000306042 CXCR5P32302 372 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 BCAT1P54687 386 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 CREMQ03060 361 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 ADCY1Q08828 1119 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 FBXO46Q6PJ61 603 aaPredicted RBP9.77□□□□□ -0.85
PTPRE-202ENST00000306042 ANO5Q75V66 913 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 SV2AQ7L0J3 742 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 DHX40Q8IX18 779 aaKnown RBP9.77□□□□□ -0.85
PTPRE-202ENST00000306042 LRRC43Q8N309 656 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 ZNF507Q8TCN5 953 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 CAPN11Q9UMQ6 739 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 TTLL13PA6NNM8 815 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 KPNA7A9QM74 516 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 ST3GAL1Q11201 340 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 UGCGQ16739 394 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 HEATR6Q6AI08 1181 aaKnown RBP9.77□□□□□ -0.85
PTPRE-202ENST00000306042 IL31Q6EBC2 164 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 PALB2Q86YC2 1186 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 LPPQ93052 612 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 IL17RAQ96F46 866 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 UNC93B1Q9H1C4 597 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 BLOC1S4Q9NUP1 217 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 FAM105AQ9NUU6 356 aa9.77□□□□□ -0.85
PTPRE-202ENST00000306042 CCNE2O96020 404 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 CLTBP09497 229 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 CCND3P30281 292 aaPredicted RBP9.76□□□□□ -0.85
PTPRE-202ENST00000306042 GARSP41250 739 aaKnown RBP9.76□□□□□ -0.85
PTPRE-202ENST00000306042 IFNAR2P48551 515 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 JAG1P78504 1218 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 FAM43BQ6ZT52 329 aaPredicted RBP9.76□□□□□ -0.85
PTPRE-202ENST00000306042 CCDC149Q6ZUS6 474 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 SLC24A5Q71RS6 500 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 KCNK18Q7Z418 384 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 ATP6V0D2Q8N8Y2 350 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 TAS1R2Q8TE23 839 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 RFFLQ8WZ73 363 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 BHMTQ93088 406 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 HSD17B14Q9BPX1 270 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 PADI3Q9ULW8 664 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 NHSQ6T4R5 1651 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.76□□□□□ -0.85
PTPRE-202ENST00000306042 ADH1AP07327 375 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 RTP1P59025 263 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 FPGSQ05932 587 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 PTK7Q13308 1070 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 CDH18Q13634 790 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 SKA1Q96BD8 255 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 KLC2Q9H0B6 622 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 ATXN3LQ9H3M9 355 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 TRMT13Q9NUP7 481 aaKnown RBP9.76□□□□□ -0.85
PTPRE-202ENST00000306042 THG1LQ9NWX6 298 aaKnown RBP9.76□□□□□ -0.85
PTPRE-202ENST00000306042 RNF14Q9UBS8 474 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 GABRQQ9UN88 632 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms