RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 SMYD3Q9H7B4 428 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 PPARGC1AQ9UBK2 798 aaKnown RBP14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 NOCTQ9UK39 431 aaKnown RBP14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 BCORQ6W2J9 1755 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 UMODL1Q5DID0 1318 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 A0A1B0GUL6 1792 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 GGPS1O95749 300 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 GZMAP12544 262 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 TAC1P20366 129 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 PSMA2P25787 234 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 HOXA7P31268 230 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 MMP14P50281 582 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 NLRP11P59045 1033 aaKnown RBP14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 SPP2Q13103 211 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 PPP2R5CQ13362 524 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 ZBTB41Q5SVQ8 909 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 NLRP9Q7RTR0 991 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 GPD1LQ8N335 351 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 LMO3Q8TAP4 145 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 AGR3Q8TD06 166 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 BSNDQ8WZ55 320 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 FAM161BQ96MY7 647 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 FAM111AQ96PZ2 611 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 ZCWPW1Q9H0M4 648 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 PIH1D1Q9NWS0 290 aaKnown RBP14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 HEY2Q9UBP5 337 aa14.05□□□□□ -0.16
TNFRSF21-201ENST00000296861 CCDC160A6NGH7 325 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 INHBAP08476 426 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 SATB1Q01826 763 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 CLEC16AQ2KHT3 1053 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 THEMIS2Q5TEJ8 643 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 TXNRD3NBQ6F5E7 133 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 BTNL9Q6UXG8 535 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 CCDC125Q86Z20 511 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 FAM71DQ8N9W8 422 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 SHC3Q92529 594 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 GMCL1Q96IK5 515 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 MYH11P35749 1972 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 SYNJ2BP-COX16A0A087WUM0 186 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 WDR64B1ANS9 1081 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 CST8O60676 142 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 ENO1P06733 434 aaKnown RBP14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 DSG3P32926 999 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 HIRAP54198 1017 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 PSMC5P62195 406 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 HIF1AQ16665 826 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 C1orf228Q6PIY5 440 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 NAF1Q96HR8 494 aaKnown RBP14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 ZNF570Q96NI8 536 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 TBC1D10AQ9BXI6 508 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 KIAA1586Q9HCI6 787 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 DMAC2Q9NW81 257 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 COX16Q9P0S2 106 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 WHRNQ9P202 907 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 AGO2Q9UKV8 859 aaKnown RBP14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 SLC12A4Q9UP95 1085 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 USH1CQ9Y6N9 552 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 COL22A1Q8NFW1 1626 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 UBTFL6P0CB48 400 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 ZCCHC18P0CG32 403 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 STAT4Q14765 748 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 DDX50Q9BQ39 737 aaKnown RBP14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 MRPL47Q9HD33 250 aaKnown RBP14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 GJA3Q9Y6H8 435 aa14.04□□□□□ -0.16
TNFRSF21-201ENST00000296861 PPP1R12AO14974 1030 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 STAM2O75886 525 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 DRG2P55039 364 aaKnown RBP14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 RCN1Q15293 331 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 PPFIBP2Q8ND30 876 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 MAGEB18Q96M61 343 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 BATF3Q9NR55 127 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 PCDHB2Q9Y5E7 798 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 TJP3O95049 919 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 IGBP1P78318 339 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 STRIP1Q5VSL9 837 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 TMEM154Q6P9G4 183 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 KCTD6Q8NC69 237 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 HELQQ8TDG4 1101 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 CYP4F11Q9HBI6 524 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 BTAF1O14981 1849 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 HAUS5O94927 633 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 RXRBP28702 533 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 ARFIP2P53365 341 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 MGAT5Q09328 741 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 PPP6R3Q5H9R7 873 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 DACT2Q5SW24 774 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 DARS2Q6PI48 645 aaKnown RBP14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 NETO2Q8NC67 525 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 MAGEC3Q8TD91 643 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 TCP10LQ8TDR4 215 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 PDGFDQ9GZP0 370 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 FBXO40Q9UH90 709 aa14.03□□□□□ -0.16
TNFRSF21-201ENST00000296861 NRAPQ86VF7 1730 aa14.02□□□□□ -0.16
TNFRSF21-201ENST00000296861 LPXNO60711 386 aa14.02□□□□□ -0.16
TNFRSF21-201ENST00000296861 VIL1P09327 827 aaKnown RBP14.02□□□□□ -0.16
TNFRSF21-201ENST00000296861 CTCFP49711 727 aaPredicted RBP14.02□□□□□ -0.16
TNFRSF21-201ENST00000296861 ATXN3P54252 364 aaPredicted RBP14.02□□□□□ -0.16
TNFRSF21-201ENST00000296861 EPHB1P54762 984 aa14.02□□□□□ -0.16
TNFRSF21-201ENST00000296861 SLC8A3P57103 927 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms