RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 DLL3Q9NYJ7 618 aa10.16□□□□□ -0.78
CNOT9-202ENST00000295701 GDE1Q9NZC3 331 aa10.16□□□□□ -0.78
CNOT9-202ENST00000295701 CEP72Q9P209 647 aa10.16□□□□□ -0.78
CNOT9-202ENST00000295701 PCDHB6Q9Y5E3 794 aa10.16□□□□□ -0.78
CNOT9-202ENST00000295701 INSL5Q9Y5Q6 135 aa10.16□□□□□ -0.78
CNOT9-202ENST00000295701 TPRP12270 2363 aaKnown RBP10.16□□□□□ -0.78
CNOT9-202ENST00000295701 PHLPP2Q6ZVD8 1323 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 SLC16A4O15374 487 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 VNN2O95498 520 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 ATF2P15336 505 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 KCNE1P15382 129 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 MUTP22033 750 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 HOXC13P31276 330 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 YARSP54577 528 aaKnown RBP10.15□□□□□ -0.78
CNOT9-202ENST00000295701 SH3BP2P78314 561 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 TWF1Q12792 350 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 LPAL2Q16609 132 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 SLC10A6Q3KNW5 377 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 CTXN3Q4LDR2 81 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 HAUS3Q68CZ6 603 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 VITQ6UXI7 678 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 C1orf186Q6ZWK4 172 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 RTL10Q7L3V2 364 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 IGSF22Q8N9C0 903 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 ZBTB44Q8NCP5 570 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 FBXO18Q8NFZ0 1043 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 NELL1Q92832 810 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 TBC1D32Q96NH3 1257 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 ASB16Q96NS5 453 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 ACAP3Q96P50 834 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 TCHPQ9BT92 498 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 MMTAG2Q9BU76 263 aaKnown RBP10.15□□□□□ -0.78
CNOT9-202ENST00000295701 MRPL4Q9BYD3 311 aaKnown RBP10.15□□□□□ -0.78
CNOT9-202ENST00000295701 HAPLN2Q9GZV7 340 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 BRD9Q9H8M2 597 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 ZFP14Q9HCL3 533 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 PARD6AQ9NPB6 346 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 KMT5AQ9NQR1 393 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 AVENQ9NQS1 362 aaPredicted RBP10.15□□□□□ -0.78
CNOT9-202ENST00000295701 ZSCAN32Q9NX65 697 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 ARHGAP28Q9P2N2 729 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 GMPR2Q9P2T1 348 aaKnown RBP10.15□□□□□ -0.78
CNOT9-202ENST00000295701 NCDNQ9UBB6 729 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 TUBGCP4Q9UGJ1 667 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 LIMCH1Q9UPQ0 1083 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 SMG5Q9UPR3 1016 aaKnown RBP10.15□□□□□ -0.78
CNOT9-202ENST00000295701 NUB1Q9Y5A7 615 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 PCDHGA2Q9Y5H1 932 aa10.15□□□□□ -0.78
CNOT9-202ENST00000295701 TIMM13Q9Y5L4 95 aaPredicted RBP10.15□□□□□ -0.78
CNOT9-202ENST00000295701 SCN1AP35498 2009 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 NPHP3-ACAD11A0A0J9YXS1 232 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 H7C4K7 107 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 SYN3O14994 580 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 LILRB5O75023 590 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 OR4Q2P0C623 313 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 MCF2P10911 925 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 MYL4P12829 197 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 TDGF1P13385 188 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 TGM1P22735 817 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 GDI1P31150 447 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 MCM4P33991 863 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 GUCY2FP51841 1108 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 CDR1P51861 262 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 DMP1Q13316 513 aaPredicted RBP10.14□□□□□ -0.79
CNOT9-202ENST00000295701 ORC2Q13416 577 aaPredicted RBP10.14□□□□□ -0.79
CNOT9-202ENST00000295701 PDIA5Q14554 519 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 TEAD2Q15562 447 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 ZRSR1Q15695 479 aaKnown RBP10.14□□□□□ -0.79
CNOT9-202ENST00000295701 MPZL3Q6UWV2 235 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 PDZD4Q76G19 769 aaPredicted RBP10.14□□□□□ -0.79
CNOT9-202ENST00000295701 TCEAL8Q8IYN2 117 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 RSPRY1Q96DX4 576 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 SUSD3Q96L08 255 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 PLIN2Q99541 437 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 TRMT61BQ9BVS5 477 aaKnown RBP10.14□□□□□ -0.79
CNOT9-202ENST00000295701 CRISPLD1Q9H336 500 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 LMAN1LQ9HAT1 526 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 ZNF334Q9HCZ1 680 aaPredicted RBP10.14□□□□□ -0.79
CNOT9-202ENST00000295701 PRMT8Q9NR22 394 aaPredicted RBP10.14□□□□□ -0.79
CNOT9-202ENST00000295701 TOPORSQ9NS56 1045 aaPredicted RBP10.14□□□□□ -0.79
CNOT9-202ENST00000295701 SLC38A7Q9NVC3 462 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 CNTN3Q9P232 1028 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 DNM3Q9UQ16 869 aa10.14□□□□□ -0.79
CNOT9-202ENST00000295701 ZNF638Q14966 1978 aaKnown RBP10.14□□□□□ -0.79
CNOT9-202ENST00000295701 CACNA1BQ00975 2339 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 CFAP99D6REC4 459 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 ZNF197O14709 1029 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 NCAM2O15394 837 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 SIAH2O43255 324 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 RPL9P32969 192 aaKnown RBP10.13□□□□□ -0.79
CNOT9-202ENST00000295701 MAGEA9P43362 315 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 RPS9P46781 194 aaKnown RBP10.13□□□□□ -0.79
CNOT9-202ENST00000295701 SOX9P48436 509 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 ATXN1P54253 815 aaKnown RBP10.13□□□□□ -0.79
CNOT9-202ENST00000295701 DMWDQ09019 674 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 GNL2Q13823 731 aaKnown RBP10.13□□□□□ -0.79
CNOT9-202ENST00000295701 GAS6Q14393 721 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 WDR44Q5JSH3 913 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 APBB1IPQ7Z5R6 666 aaPredicted RBP10.13□□□□□ -0.79
CNOT9-202ENST00000295701 MAP4K3Q8IVH8 894 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms