RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 WDTC1Q8N5D0 677 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 NLRP7Q8WX94 980 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 CHST7Q9NS84 486 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 PRMT7Q9NVM4 692 aaPredicted RBP20.5■□□□□ 0.87
BRAF-201ENST00000288602 SCN4AP35499 1836 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 LOC102724159A0A0B4J2E5 919 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 H0YGN5 161 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 ARF4P18085 180 aaPredicted RBP20.49■□□□□ 0.87
BRAF-201ENST00000288602 TMOD1P28289 359 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 PWP2Q15269 919 aaKnown RBP20.49■□□□□ 0.87
BRAF-201ENST00000288602 ZSCAN26Q16670 478 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 CYP4A22Q5TCH4 519 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 MTHFD1LQ6UB35 978 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 ZDHHC24Q6UX98 284 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 C1orf127Q8N9H9 656 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 SCLT1Q96NL6 688 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 RABEP2Q9H5N1 569 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 PDZD7Q9H5P4 517 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 RASAL2Q9UJF2 1139 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 GINS2Q9Y248 185 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 NFS1Q9Y697 457 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 ITGB3P05106 788 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 MMP8P22894 467 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 TMEM62Q0P6H9 643 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 ATP13A4Q4VNC1 1196 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 SGO2Q562F6 1265 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 ANKS1BQ7Z6G8 1248 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 LINC01465Q8N7H1 131 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 MAML3Q96JK9 1138 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 MRPL47Q9HD33 250 aaKnown RBP20.49■□□□□ 0.87
BRAF-201ENST00000288602 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.49■□□□□ 0.87
BRAF-201ENST00000288602 GRHL1Q9NZI5 618 aa20.49■□□□□ 0.87
BRAF-201ENST00000288602 FSCN2O14926 492 aa20.48■□□□□ 0.87
BRAF-201ENST00000288602 SLC1A1P43005 524 aa20.48■□□□□ 0.87
BRAF-201ENST00000288602 CYP1B1Q16678 543 aa20.48■□□□□ 0.87
BRAF-201ENST00000288602 PRAMEF19Q5SWL8 479 aa20.48■□□□□ 0.87
BRAF-201ENST00000288602 FOXR1Q6PIV2 292 aa20.48■□□□□ 0.87
BRAF-201ENST00000288602 FEZF2Q8TBJ5 459 aa20.48■□□□□ 0.87
BRAF-201ENST00000288602 GTF3C2Q8WUA4 911 aaPredicted RBP20.48■□□□□ 0.87
BRAF-201ENST00000288602 STRNO43815 780 aa20.48■□□□□ 0.87
BRAF-201ENST00000288602 CD19P15391 556 aa20.48■□□□□ 0.87
BRAF-201ENST00000288602 C1QBPQ07021 282 aaKnown RBP20.48■□□□□ 0.87
BRAF-201ENST00000288602 MARCH8Q5T0T0 291 aa20.48■□□□□ 0.87
BRAF-201ENST00000288602 UBAP2Q5T6F2 1119 aaKnown RBP20.48■□□□□ 0.87
BRAF-201ENST00000288602 LEKR1Q6ZMV7 388 aa20.48■□□□□ 0.87
BRAF-201ENST00000288602 CD302Q8IX05 232 aa20.48■□□□□ 0.87
BRAF-201ENST00000288602 NPLOC4Q8TAT6 608 aa20.48■□□□□ 0.87
BRAF-201ENST00000288602 VCPIP1Q96JH7 1222 aa20.48■□□□□ 0.87
BRAF-201ENST00000288602 MCEEQ96PE7 176 aa20.48■□□□□ 0.87
BRAF-201ENST00000288602 SDCBP2Q9H190 292 aa20.48■□□□□ 0.87
BRAF-201ENST00000288602 GBA2Q9HCG7 927 aaPredicted RBP20.48■□□□□ 0.87
BRAF-201ENST00000288602 PARVAQ9NVD7 372 aa20.48■□□□□ 0.87
BRAF-201ENST00000288602 TJP2Q9UDY2 1190 aa20.48■□□□□ 0.87
BRAF-201ENST00000288602 R3HDM2Q9Y2K5 976 aaKnown RBP20.48■□□□□ 0.87
BRAF-201ENST00000288602 RBM47A0AV96 593 aaKnown RBP20.47■□□□□ 0.87
BRAF-201ENST00000288602 PPFIA4O75335 1185 aa20.47■□□□□ 0.87
BRAF-201ENST00000288602 ZNF844Q08AG5 666 aa20.47■□□□□ 0.87
BRAF-201ENST00000288602 LRRC31Q6UY01 552 aa20.47■□□□□ 0.87
BRAF-201ENST00000288602 MORF4L1Q9UBU8 362 aa20.47■□□□□ 0.87
BRAF-201ENST00000288602 HMGXB4Q9UGU5 601 aa20.47■□□□□ 0.87
BRAF-201ENST00000288602 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.47■□□□□ 0.87
BRAF-201ENST00000288602 CELF2O95319 508 aaKnown RBP20.47■□□□□ 0.87
BRAF-201ENST00000288602 RALAP11233 206 aa20.47■□□□□ 0.87
BRAF-201ENST00000288602 IRX5P78411 483 aaPredicted RBP20.47■□□□□ 0.87
BRAF-201ENST00000288602 LACTBP83111 547 aaPredicted RBP20.47■□□□□ 0.87
BRAF-201ENST00000288602 ANKRD23Q86SG2 305 aa20.47■□□□□ 0.87
BRAF-201ENST00000288602 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.47■□□□□ 0.87
BRAF-201ENST00000288602 PLVAPQ9BX97 442 aa20.47■□□□□ 0.87
BRAF-201ENST00000288602 NFKBIZQ9BYH8 718 aa20.47■□□□□ 0.87
BRAF-201ENST00000288602 SMYD3Q9H7B4 428 aa20.47■□□□□ 0.87
BRAF-201ENST00000288602 MAGEB2O15479 319 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 GCLCP48506 637 aaPredicted RBP20.46■□□□□ 0.87
BRAF-201ENST00000288602 ZNF252P-AS1Q0IIN9 211 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 TRIP13Q15645 432 aaPredicted RBP20.46■□□□□ 0.87
BRAF-201ENST00000288602 GRIK4Q16099 956 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 SLC10A6Q3KNW5 377 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 DENND1BQ6P3S1 775 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 OR6J1Q8NGC5 347 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 RNF25Q96BH1 459 aaPredicted RBP20.46■□□□□ 0.87
BRAF-201ENST00000288602 CXCL16Q9H2A7 254 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 SETD4Q9NVD3 440 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 BCCIPQ9P287 314 aaKnown RBP eCLIP20.46■□□□□ 0.87
BRAF-201ENST00000288602 SCINQ9Y6U3 715 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 PI4K2BG5E9Z4 385 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 MMP3P08254 477 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 OGDHQ02218 1023 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 ACVR2BQ13705 512 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 GRB14Q14449 540 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 PPP1R7Q15435 360 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 ZNF667Q5HYK9 610 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 RHOT1Q8IXI2 618 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 KIAA0319LQ8IZA0 1049 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 EMID1Q96A84 441 aaPredicted RBP20.46■□□□□ 0.87
BRAF-201ENST00000288602 LENG1Q96BZ8 264 aaPredicted RBP20.46■□□□□ 0.87
BRAF-201ENST00000288602 ACSF2Q96CM8 615 aaPredicted RBP20.46■□□□□ 0.87
BRAF-201ENST00000288602 ATP6V1G3Q96LB4 118 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 TWNKQ96RR1 684 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 TINF2Q9BSI4 451 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 CAPS2Q9BXY5 557 aa20.46■□□□□ 0.87
BRAF-201ENST00000288602 LRRC19Q9H756 370 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms