RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 PIDD1Q9HB75 910 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 LGR6Q9HBX8 967 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 WDR35Q9P2L0 1181 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 ZC3H4Q9UPT8 1303 aaKnown RBP12.63□□□□□ -0.39
SRRM4-201ENST00000267260 VIRMAQ69YN4 1812 aaKnown RBP12.62□□□□□ -0.39
SRRM4-201ENST00000267260 CNTN1Q12860 1018 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 RESTQ13127 1097 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 FBXO40Q9UH90 709 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 MTSS1O43312 755 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 MFN2O95140 757 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 FNTAP49354 379 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 SYCP2LQ5T4T6 812 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 C12orf60Q5U649 245 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 SPATA4Q8NEY3 305 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 RAD54LQ92698 747 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 NOD2Q9HC29 1040 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 KLHL3Q9UH77 587 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 GRID1Q9ULK0 1009 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 ASXL2Q76L83 1435 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 SUPT3HB4E1H0 165 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 ZNF862O60290 1169 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 SPRP35270 261 aaPredicted RBP12.62□□□□□ -0.39
SRRM4-201ENST00000267260 MAPKAPK2P49137 400 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 ARL4DP49703 201 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 UBXN2AP68543 259 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 SNX31Q8N9S9 440 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 ZNF483Q8TF39 744 aaPredicted RBP12.62□□□□□ -0.39
SRRM4-201ENST00000267260 SENP7Q9BQF6 1050 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 SLC40A1Q9NP59 571 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 AVENQ9NQS1 362 aaPredicted RBP12.62□□□□□ -0.39
SRRM4-201ENST00000267260 STK39Q9UEW8 545 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 SF3B1O75533 1304 aaKnown RBP eCLIP12.62□□□□□ -0.39
SRRM4-201ENST00000267260 IGF2BP3O00425 579 aaKnown RBP eCLIP12.62□□□□□ -0.39
SRRM4-201ENST00000267260 FCGR1AP12314 374 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 STX5Q13190 355 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 ATXN7L3BQ96GX2 97 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 GDAQ9Y2T3 454 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 PCDHB6Q9Y5E3 794 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.62□□□□□ -0.39
SRRM4-201ENST00000267260 BCL10O95999 233 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 USP17L2Q6R6M4 530 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 LINC00523Q86TU6 105 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 FRMD8Q9BZ67 464 aaPredicted RBP12.62□□□□□ -0.39
SRRM4-201ENST00000267260 REXO4Q9GZR2 422 aaKnown RBP12.62□□□□□ -0.39
SRRM4-201ENST00000267260 CD209Q9NNX6 404 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 CD274Q9NZQ7 290 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.62□□□□□ -0.39
SRRM4-201ENST00000267260 ENOPH1Q9UHY7 261 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 PRCPP42785 496 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 RIN3Q8TB24 985 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 RNF25Q96BH1 459 aaPredicted RBP12.62□□□□□ -0.39
SRRM4-201ENST00000267260 COA7Q96BR5 231 aa12.62□□□□□ -0.39
SRRM4-201ENST00000267260 ZFRQ96KR1 1074 aaKnown RBP12.62□□□□□ -0.39
SRRM4-201ENST00000267260 FYNP06241 537 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 EPS8Q12929 822 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 COASYQ13057 564 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 STILQ15468 1287 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 TAF8Q7Z7C8 310 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 CYP4Z1Q86W10 505 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 WNK4Q96J92 1243 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 ELMO2Q96JJ3 720 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 TASP1Q9H6P5 420 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 BCAP31P51572 246 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 VSNL1P62760 191 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 FAM83BQ5T0W9 1011 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 BTBD8Q5XKL5 378 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 MOSPD2Q8NHP6 518 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 PHKA1P46020 1223 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 RMND5BQ96G75 393 aaPredicted RBP12.61□□□□□ -0.39
SRRM4-201ENST00000267260 MAGED4Q96JG8 741 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 ZSWIM5Q9P217 1185 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 MYO3BQ8WXR4 1341 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 PVALEFA0A1B0GWK0 134 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 SERPIND1P05546 499 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 TCN1P20061 433 aaPredicted RBP12.61□□□□□ -0.39
SRRM4-201ENST00000267260 YWHABP31946 246 aaKnown RBP12.61□□□□□ -0.39
SRRM4-201ENST00000267260 KCNV1Q6PIU1 500 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 ZNF513Q8N8E2 541 aaPredicted RBP12.61□□□□□ -0.39
SRRM4-201ENST00000267260 RBAKQ9NYW8 714 aaPredicted RBP12.61□□□□□ -0.39
SRRM4-201ENST00000267260 ABCB1P08183 1280 aaPredicted RBP12.61□□□□□ -0.39
SRRM4-201ENST00000267260 RXRGP48443 463 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 TTLL4Q14679 1199 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 NFIL3Q16649 462 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 DNAJC10Q8IXB1 793 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 UBXN6Q9BZV1 441 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 BTBD7Q9P203 1132 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 SPACA6W5XKT8 324 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 TRAPPC3O43617 180 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 PEX1O43933 1283 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 GCLMP48507 274 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 CORO7P57737 925 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 TAF2Q6P1X5 1199 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 RNFT2Q96EX2 444 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 PLEKHA5Q9HAU0 1116 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 ADGRA2Q96PE1 1338 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 NCAPD2Q15021 1401 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 CNOT3O75175 753 aaKnown RBP12.61□□□□□ -0.39
SRRM4-201ENST00000267260 GPR162Q16538 588 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 SLC25A24Q6NUK1 477 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 OLFML1Q6UWY5 402 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms