RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SENP6Q9GZR1 1112 aaPredicted RBP9.26□□□□□ -0.93
VAPB-201ENST00000265619 IKZF4Q9H2S9 585 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 KCNK13Q9HB14 408 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 SIX2Q9NPC8 291 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 PCYOX1Q9UHG3 505 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 RPL26L1Q9UNX3 145 aaKnown RBP9.26□□□□□ -0.93
VAPB-201ENST00000265619 EIF3FO00303 357 aaPredicted RBP9.25□□□□□ -0.93
VAPB-201ENST00000265619 TXNDC9O14530 226 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 XPOTO43592 962 aaKnown RBP9.25□□□□□ -0.93
VAPB-201ENST00000265619 HAUS5O94927 633 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 MUTP22033 750 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 COILP38432 576 aaPredicted RBP9.25□□□□□ -0.93
VAPB-201ENST00000265619 CETN2P41208 172 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 RGS2P41220 211 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 CYLC2Q14093 348 aaPredicted RBP9.25□□□□□ -0.93
VAPB-201ENST00000265619 MAP7D1Q3KQU3 841 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 LMBRD2Q68DH5 695 aaPredicted RBP9.25□□□□□ -0.93
VAPB-201ENST00000265619 UNC13DQ70J99 1090 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 ALYREFQ86V81 257 aaKnown RBP9.25□□□□□ -0.93
VAPB-201ENST00000265619 PNMA1Q8ND90 353 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 ZNF75CPQ92670 426 aaPredicted RBP9.25□□□□□ -0.93
VAPB-201ENST00000265619 TEKT1Q969V4 418 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 NSL1Q96IY1 281 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 GPBP1L1Q9HC44 474 aaPredicted RBP9.25□□□□□ -0.93
VAPB-201ENST00000265619 SPO11Q9Y5K1 396 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 CACNA1SQ13698 1873 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 ATAD5Q96QE3 1844 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 ABCB11O95342 1321 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 A0A1W2PRG0 241 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 POTEMA6NI47 508 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 H3BRJ5 948 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 RGL2O15211 777 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 CCNT1O60563 726 aaKnown RBP9.25□□□□□ -0.93
VAPB-201ENST00000265619 DLATP10515 647 aaKnown RBP9.25□□□□□ -0.93
VAPB-201ENST00000265619 RARBP10826 455 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 VCLP18206 1134 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 LRRC63Q05C16 580 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 PDK3Q15120 406 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 PDK4Q16654 411 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 COBLL1Q53SF7 1204 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 C1orf228Q6PIY5 440 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 LRRC6Q86X45 466 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 RNF169Q8NCN4 708 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 HERPUD2Q9BSE4 406 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 RTFDC1Q9BY42 306 aaPredicted RBP9.25□□□□□ -0.93
VAPB-201ENST00000265619 DDX4Q9NQI0 724 aaKnown RBP9.25□□□□□ -0.93
VAPB-201ENST00000265619 SLC7A8Q9UHI5 535 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 TRAF3IP3Q9Y228 551 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 ALG6Q9Y672 507 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 MYH11P35749 1972 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 SCN7AQ01118 1682 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 C15orf38-AP3S2A0A0A6YYH1 394 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 CCDC194A0A1B0GVG4 234 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 P4HA2O15460 535 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 THAP12O43422 761 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 OXSR1O95747 527 aaPredicted RBP9.25□□□□□ -0.93
VAPB-201ENST00000265619 GAS8O95995 478 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 ZFXP17010 805 aaPredicted RBP9.25□□□□□ -0.93
VAPB-201ENST00000265619 IVDP26440 423 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 ITGA8P53708 1063 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 COG7P83436 770 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 RELAQ04206 551 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 NR1H3Q13133 447 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 CYP4F22Q6NT55 531 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 ELMSAN1Q6PJG2 1045 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 Q6ZNX1 250 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 TRMT10CQ7L0Y3 403 aaKnown RBP9.25□□□□□ -0.93
VAPB-201ENST00000265619 ARPINQ7Z6K5 226 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 IFNLR1Q8IU57 520 aaPredicted RBP9.25□□□□□ -0.93
VAPB-201ENST00000265619 EFCAB3Q8N7B9 438 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 GSTCDQ8NEC7 633 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 COA1Q9GZY4 146 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 SAR1AQ9NR31 198 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 NDE1Q9NXR1 346 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 IL1RAPL1Q9NZN1 696 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 PCDHA4Q9UN74 947 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 RBMX2Q9Y388 322 aaKnown RBP9.25□□□□□ -0.93
VAPB-201ENST00000265619 TIMM22Q9Y584 194 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 LAMB2P55268 1798 aa9.25□□□□□ -0.93
VAPB-201ENST00000265619 FBP2O00757 339 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 ADCY3O60266 1144 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 DNAJC6O75061 913 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 CDK8P49336 464 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 ENTPD1P49961 510 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 SNAP25P60880 206 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 FKBP3Q00688 224 aaKnown RBP9.24□□□□□ -0.93
VAPB-201ENST00000265619 HNRNPDQ14103 355 aaKnown RBP9.24□□□□□ -0.93
VAPB-201ENST00000265619 EFTUD2Q15029 972 aaKnown RBP eCLIP9.24□□□□□ -0.93
VAPB-201ENST00000265619 TLR1Q15399 786 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 TTLL6Q8N841 843 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 RBM15BQ8NDT2 890 aaKnown RBP9.24□□□□□ -0.93
VAPB-201ENST00000265619 PSTPIP2Q9H939 334 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 NEU2Q9Y3R4 380 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 TELO2Q9Y4R8 837 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 UBR3Q6ZT12 1888 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 SMIM31A0A1B0GVY4 71 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 MEI4A8MW99 385 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 UQCRBP14927 111 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 ADRA1DP25100 572 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 HOXA10P31260 410 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms