RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 EFHC1Q5JVL4 640 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 JAMLQ86YT9 394 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 DCP1BQ8IZD4 617 aaKnown RBP17.93■□□□□ 0.46
ACTN4-201ENST00000252699 DNAJC18Q9H819 358 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 UBN1Q9NPG3 1134 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 KPNA6O60684 536 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 VDRP11473 427 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 RRM1P23921 792 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 PTGER2P43116 358 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 TBX2Q13207 712 aaPredicted RBP17.93■□□□□ 0.46
ACTN4-201ENST00000252699 BYSLQ13895 437 aaKnown RBP17.93■□□□□ 0.46
ACTN4-201ENST00000252699 IQSEC1Q6DN90 963 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 RUBCNQ92622 972 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.93■□□□□ 0.462e-7■■□□□ 14.5
ACTN4-201ENST00000252699 TJP2Q9UDY2 1190 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 KIAA1257Q9ULG3 409 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 ZNF142P52746 1687 aaPredicted RBP17.93■□□□□ 0.46
ACTN4-201ENST00000252699 LRRC37A3O60309 1634 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 ANKRD63C9JTQ0 380 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 LGALS2P05162 132 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 SKIP12755 728 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 AKR1A1P14550 325 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 FGFR4P22455 802 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 NR1H3Q13133 447 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 MYLK4Q86YV6 388 aaPredicted RBP17.93■□□□□ 0.46
ACTN4-201ENST00000252699 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.93■□□□□ 0.461e-6■■■■■ 90.7
ACTN4-201ENST00000252699 TRAIPQ9BWF2 469 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 TSTA3Q13630 321 aaPredicted RBP17.93■□□□□ 0.46
ACTN4-201ENST00000252699 SPARCL1Q14515 664 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 DNAAF5Q86Y56 855 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 MTMR14Q8NCE2 650 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 TTC17Q96AE7 1141 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 CELF4Q9BZC1 486 aaKnown RBP17.93■□□□□ 0.46
ACTN4-201ENST00000252699 PORCNQ9H237 461 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 L2HGDHQ9H9P8 463 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 INTS13Q9NVM9 706 aa17.93■□□□□ 0.46
ACTN4-201ENST00000252699 DFFAO00273 331 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 S100BP04271 92 aaPredicted RBP17.92■□□□□ 0.46
ACTN4-201ENST00000252699 YY1P25490 414 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 P3H1Q32P28 736 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 CELF3Q5SZQ8 465 aaKnown RBP17.92■□□□□ 0.46
ACTN4-201ENST00000252699 SOCS4Q8WXH5 440 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 IFT43Q96FT9 208 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 ZSWIM1Q9BR11 485 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 MID2Q9UJV3 735 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 ASTN2O75129 1339 aaPredicted RBP17.92■□□□□ 0.46
ACTN4-201ENST00000252699 MCF2P10911 925 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 RECQLP46063 649 aaPredicted RBP17.92■□□□□ 0.46
ACTN4-201ENST00000252699 TREML2Q5T2D2 321 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 SLC7A14Q8TBB6 771 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 ATP6V1E2Q96A05 226 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 TINF2Q9BSI4 451 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 RSAD1Q9HA92 442 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 OSGEPQ9NPF4 335 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 APRTP07741 180 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 RBP3P10745 1247 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 BRAFP15056 766 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 RAB6BQ9NRW1 208 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 TAF1BQ53T94 588 aaPredicted RBP17.92■□□□□ 0.46
ACTN4-201ENST00000252699 ARRDC4Q8NCT1 418 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 SPATA18Q8TC71 538 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 ELMO3Q96BJ8 720 aa17.92■□□□□ 0.46
ACTN4-201ENST00000252699 SEPT5Q99719 369 aaPredicted RBP17.92■□□□□ 0.46
ACTN4-201ENST00000252699 ITIH2P19823 946 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 RNF219Q5W0B1 726 aaPredicted RBP17.91■□□□□ 0.46
ACTN4-201ENST00000252699 DDX42Q86XP3 938 aaKnown RBP eCLIP17.91■□□□□ 0.46
ACTN4-201ENST00000252699 MMGT1Q8N4V1 131 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 TRIM56Q9BRZ2 755 aaKnown RBP17.91■□□□□ 0.46
ACTN4-201ENST00000252699 ANGPTL3Q9Y5C1 460 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 IGKV6D-41A0A0C4DH26 115 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 RAP1GAPP47736 663 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 CARSP49589 748 aaKnown RBP17.91■□□□□ 0.46
ACTN4-201ENST00000252699 MGAT5BQ3V5L5 792 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 SYCP2LQ5T4T6 812 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 LRRC55Q6ZSA7 311 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 EPM2AIP1Q7L775 607 aaPredicted RBP17.91■□□□□ 0.46
ACTN4-201ENST00000252699 SLC13A5Q86YT5 568 aaPredicted RBP17.91■□□□□ 0.46
ACTN4-201ENST00000252699 MLXIPLQ9NP71 852 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 SNTG2Q9NY99 539 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 KLRG2A4D1S0 409 aaPredicted RBP17.91■□□□□ 0.46
ACTN4-201ENST00000252699 TPD52P55327 224 aaPredicted RBP17.91■□□□□ 0.46
ACTN4-201ENST00000252699 MFSD10Q14728 455 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 BRSK2Q8IWQ3 736 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 ACSF2Q96CM8 615 aaPredicted RBP17.91■□□□□ 0.46
ACTN4-201ENST00000252699 ITGB3BPQ13352 177 aaPredicted RBP17.91■□□□□ 0.46
ACTN4-201ENST00000252699 RCN2Q14257 317 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 SMAD1Q15797 465 aaKnown RBP17.91■□□□□ 0.46
ACTN4-201ENST00000252699 CBWD6Q4V339 395 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 PAN2Q504Q3 1202 aaKnown RBP17.91■□□□□ 0.46
ACTN4-201ENST00000252699 CBWD3Q5JTY5 395 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 CBWD5Q5RIA9 395 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 ARHGEF19Q8IW93 802 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 RBM15Q96T37 977 aaKnown RBP eCLIP17.91■□□□□ 0.468e-7■□□□□ 10.9
ACTN4-201ENST00000252699 MTG1Q9BT17 334 aaPredicted RBP17.91■□□□□ 0.46
ACTN4-201ENST00000252699 RIPK3Q9Y572 518 aa17.91■□□□□ 0.46
ACTN4-201ENST00000252699 SPATA31C2B4DYI2 1134 aa17.9■□□□□ 0.46
ACTN4-201ENST00000252699 CYB561D2O14569 222 aa17.9■□□□□ 0.46
ACTN4-201ENST00000252699 ECM1Q16610 540 aa17.9■□□□□ 0.46
ACTN4-201ENST00000252699 NKX2-3Q8TAU0 364 aa17.9■□□□□ 0.46
ACTN4-201ENST00000252699 ATP6V1G3Q96LB4 118 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms