RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ADSSL1Q8N142 457 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 CSGALNACT2Q8N6G5 542 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 PIK3R5Q8WYR1 880 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 RABGGTAQ92696 567 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 EDAQ92838 391 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 ERCC4Q92889 916 aaPredicted RBP12.17□□□□□ -0.46
SF3B6-201ENST00000233468 CCDC127Q96BQ5 260 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 SUSD3Q96L08 255 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 MFSD14AQ96MC6 490 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 POP1Q99575 1024 aaKnown RBP12.17□□□□□ -0.46
SF3B6-201ENST00000233468 MKNK1Q9BUB5 465 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 VN1R3Q9BXE9 311 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 RXFP1Q9HBX9 757 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 PDE11AQ9HCR9 933 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 INTS13Q9NVM9 706 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 DACH1Q9UI36 760 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 DSEQ9UL01 958 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 CFAP54Q96N23 3096 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 ANO9A1A5B4 782 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 LOC730098B7Z3J9 87 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 F8W810 466 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 PIRO00625 290 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 STX10O60499 249 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 LILRB3O75022 631 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 FGFR1OPO95684 399 aaKnown RBP12.16□□□□□ -0.46
SF3B6-201ENST00000233468 KRT19P08727 400 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 ODC1P11926 461 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 HOXB8P17481 243 aaPredicted RBP12.16□□□□□ -0.46
SF3B6-201ENST00000233468 CCNE1P24864 410 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 LILRA4P59901 499 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 PSMD5Q16401 504 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 CENPPQ6IPU0 288 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 TAS1R1Q7RTX1 841 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 METTL23Q86XA0 190 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 EFCAB13Q8IY85 973 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 SMYD4Q8IYR2 804 aaPredicted RBP12.16□□□□□ -0.46
SF3B6-201ENST00000233468 LRRC52Q8N7C0 313 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 MLKLQ8NB16 471 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 ZSWIM2Q8NEG5 633 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 KLHL5Q96PQ7 755 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 CGRRF1Q99675 332 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 APOL5Q9BWW9 433 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 KRTAP3-3Q9BYR6 98 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 KRTAP3-2Q9BYR7 98 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 DZANK1Q9NVP4 752 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 CACNG4Q9UBN1 327 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 BACE2Q9Y5Z0 518 aa12.16□□□□□ -0.46
SF3B6-201ENST00000233468 M0QZQ0 153 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 BIN1O00499 593 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 IKBKBO14920 756 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 SLC16A3O15427 465 aaKnown RBP12.15□□□□□ -0.46
SF3B6-201ENST00000233468 CLASP2O75122 1294 aaKnown RBP12.15□□□□□ -0.46
SF3B6-201ENST00000233468 PHACTR2O75167 634 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 GLUD1P00367 558 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 CNPP09543 421 aaKnown RBP12.15□□□□□ -0.46
SF3B6-201ENST00000233468 TYMPP19971 482 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 BRCC3P46736 316 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 AARSP49588 968 aaKnown RBP eCLIP12.15□□□□□ -0.46
SF3B6-201ENST00000233468 PAK1Q13153 545 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 TRPC3Q13507 836 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 ZCWPW2Q504Y3 356 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 ISM2Q6H9L7 571 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 ZNF280DQ6N043 979 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 TMEM184AQ6ZMB5 413 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 TRIM67Q6ZTA4 783 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 FAM186BQ8IYM0 893 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 C3orf58Q8NDZ4 430 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 PRSS33Q8NF86 280 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 HDAC7Q8WUI4 952 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 AUTS2Q8WXX7 1259 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 SYAP1Q96A49 352 aaPredicted RBP12.15□□□□□ -0.46
SF3B6-201ENST00000233468 RPGRIP1Q96KN7 1286 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 MTMR12Q9C0I1 747 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 CDH22Q9UJ99 828 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 AGAP1Q9UPQ3 857 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 VPS13AQ96RL7 3174 aa12.15□□□□□ -0.46
SF3B6-201ENST00000233468 TMEM221A6NGB7 291 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 KPNA7A9QM74 516 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 M0R296 226 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 TEX28O15482 410 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 HUS1O60921 280 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 GNA14O95837 355 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 ITGB3P05106 788 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 SP100P23497 879 aaPredicted RBP12.14□□□□□ -0.47
SF3B6-201ENST00000233468 TKTP29401 623 aaKnown RBP12.14□□□□□ -0.47
SF3B6-201ENST00000233468 POLR2BP30876 1174 aaKnown RBP12.14□□□□□ -0.47
SF3B6-201ENST00000233468 VAMP7P51809 220 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 GUCY2FP51841 1108 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 ZXDAP98168 799 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 YWHAHQ04917 246 aaPredicted RBP12.14□□□□□ -0.47
SF3B6-201ENST00000233468 CAMK2BQ13554 666 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 CBX2Q14781 532 aaPredicted RBP12.14□□□□□ -0.47
SF3B6-201ENST00000233468 CT47A1Q5JQC4 288 aaPredicted RBP12.14□□□□□ -0.47
SF3B6-201ENST00000233468 RTP2Q5QGT7 225 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 KLHL10Q6JEL2 608 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 CD300LGQ6UXG3 332 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 RTL10Q7L3V2 364 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 TRAPPC11Q7Z392 1133 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 THEM5Q8N1Q8 247 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 C1orf127Q8N9H9 656 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms