RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 HERC6Q8IVU3 1022 aa17.72■□□□□ 0.43
CHMP5-201ENST00000223500 CCDC112Q8NEF3 446 aa17.72■□□□□ 0.43
CHMP5-201ENST00000223500 APPL2Q8NEU8 664 aa17.72■□□□□ 0.43
CHMP5-201ENST00000223500 RABGGTAQ92696 567 aa17.72■□□□□ 0.43
CHMP5-201ENST00000223500 SENP8Q96LD8 212 aa17.72■□□□□ 0.43
CHMP5-201ENST00000223500 ARID3AQ99856 593 aa17.72■□□□□ 0.43
CHMP5-201ENST00000223500 DNAI2Q9GZS0 605 aa17.72■□□□□ 0.43
CHMP5-201ENST00000223500 SMYD3Q9H7B4 428 aa17.72■□□□□ 0.43
CHMP5-201ENST00000223500 RC3H2Q9HBD1 1191 aaKnown RBP17.72■□□□□ 0.43
CHMP5-201ENST00000223500 CISHQ9NSE2 258 aa17.72■□□□□ 0.43
CHMP5-201ENST00000223500 B4GALT3O60512 393 aa17.71■□□□□ 0.43
CHMP5-201ENST00000223500 GFPT2O94808 682 aa17.71■□□□□ 0.43
CHMP5-201ENST00000223500 KIF4AO95239 1232 aa17.71■□□□□ 0.43
CHMP5-201ENST00000223500 GALTP07902 379 aa17.71■□□□□ 0.43
CHMP5-201ENST00000223500 CD58P19256 250 aa17.71■□□□□ 0.43
CHMP5-201ENST00000223500 HNRNPH3P31942 346 aaKnown RBP17.71■□□□□ 0.43
CHMP5-201ENST00000223500 SLC11A1P49279 550 aa17.71■□□□□ 0.43
CHMP5-201ENST00000223500 AARSP49588 968 aaKnown RBP eCLIP17.71■□□□□ 0.43
CHMP5-201ENST00000223500 BCAR1P56945 870 aa17.71■□□□□ 0.43
CHMP5-201ENST00000223500 BPIFB4P59827 614 aa17.71■□□□□ 0.43
CHMP5-201ENST00000223500 HTRA4P83105 476 aaPredicted RBP17.71■□□□□ 0.43
CHMP5-201ENST00000223500 RASIP1Q5U651 963 aa17.71■□□□□ 0.43
CHMP5-201ENST00000223500 LRRC8AQ8IWT6 810 aa17.71■□□□□ 0.43
CHMP5-201ENST00000223500 FAM71AQ8IYT1 594 aa17.71■□□□□ 0.43
CHMP5-201ENST00000223500 C3orf58Q8NDZ4 430 aa17.71■□□□□ 0.43
CHMP5-201ENST00000223500 RAD9AQ99638 391 aa17.71■□□□□ 0.43
CHMP5-201ENST00000223500 GPR88Q9GZN0 384 aa17.71■□□□□ 0.43
CHMP5-201ENST00000223500 BZW2Q9Y6E2 419 aaKnown RBP17.71■□□□□ 0.43
CHMP5-201ENST00000223500 TACC1O75410 805 aa17.7■□□□□ 0.42
CHMP5-201ENST00000223500 ODC1P11926 461 aa17.7■□□□□ 0.42
CHMP5-201ENST00000223500 LAG3P18627 525 aa17.7■□□□□ 0.42
CHMP5-201ENST00000223500 ACO1P21399 889 aaKnown RBP17.7■□□□□ 0.42
CHMP5-201ENST00000223500 RAP1GAPP47736 663 aa17.7■□□□□ 0.42
CHMP5-201ENST00000223500 CDH8P55286 799 aa17.7■□□□□ 0.42
CHMP5-201ENST00000223500 ARID5AQ03989 594 aa17.7■□□□□ 0.42
CHMP5-201ENST00000223500 TMEM270Q6UE05 265 aa17.7■□□□□ 0.42
CHMP5-201ENST00000223500 METTL23Q86XA0 190 aa17.7■□□□□ 0.42
CHMP5-201ENST00000223500 TMEM86AQ8N2M4 240 aa17.7■□□□□ 0.42
CHMP5-201ENST00000223500 FIBCD1Q8N539 461 aa17.7■□□□□ 0.42
CHMP5-201ENST00000223500 TRIM44Q96DX7 344 aaPredicted RBP17.7■□□□□ 0.42
CHMP5-201ENST00000223500 RNPC3Q96LT9 517 aaKnown RBP17.7■□□□□ 0.42
CHMP5-201ENST00000223500 BAG1Q99933 345 aaPredicted RBP17.7■□□□□ 0.42
CHMP5-201ENST00000223500 SNX25Q9H3E2 840 aa17.7■□□□□ 0.42
CHMP5-201ENST00000223500 CWH43Q9H720 699 aa17.7■□□□□ 0.42
CHMP5-201ENST00000223500 AAASQ9NRG9 546 aa17.7■□□□□ 0.42
CHMP5-201ENST00000223500 DSEQ9UL01 958 aa17.7■□□□□ 0.42
CHMP5-201ENST00000223500 TLL1O43897 1013 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 SERPING1P05155 500 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 PNMA6AP0CW24 399 aaPredicted RBP17.69■□□□□ 0.42
CHMP5-201ENST00000223500 CDK17Q00537 523 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 PTK2Q05397 1052 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 KLHL30Q0D2K2 578 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 INCA1Q0VD86 236 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 ELAVL2Q12926 359 aaKnown RBP17.69■□□□□ 0.42
CHMP5-201ENST00000223500 MEA1Q16626 185 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 SOWAHAQ2M3V2 549 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 TIGD5Q53EQ6 642 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 CYP26C1Q6V0L0 522 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 TMTC1Q8IUR5 882 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 UBR7Q8N806 425 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 SPATA18Q8TC71 538 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 HASPINQ8TF76 798 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 SUSD3Q96L08 255 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 ZNF558Q96NG5 402 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 UBE2OQ9C0C9 1292 aaKnown RBP17.69■□□□□ 0.42
CHMP5-201ENST00000223500 SDCBP2Q9H190 292 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 ADAM28Q9UKQ2 775 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 BARX2Q9UMQ3 279 aaPredicted RBP17.69■□□□□ 0.42
CHMP5-201ENST00000223500 CNTN6Q9UQ52 1028 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 COL4A6Q14031 1691 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 M0QZQ0 153 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 CYP26A1O43174 497 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 BRCC3P46736 316 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 TDRD12Q587J7 1177 aaKnown RBP17.69■□□□□ 0.42
CHMP5-201ENST00000223500 CD300LGQ6UXG3 332 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 LIMS2Q7Z4I7 341 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 IRF2BP2Q7Z5L9 587 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 UNC93AQ86WB7 457 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 ADGRF2Q8IZF7 708 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 RBBP8NLQ8NC74 664 aaPredicted RBP17.69■□□□□ 0.42
CHMP5-201ENST00000223500 OR6B3Q8NGW1 331 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 HCSTQ9UBK5 93 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 PCDHB8Q9UN66 801 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 L1RE1Q9UN81 338 aa17.69■□□□□ 0.42
CHMP5-201ENST00000223500 MRPL42Q9Y6G3 142 aaKnown RBP17.69■□□□□ 0.42
CHMP5-201ENST00000223500 CILPO75339 1184 aa17.68■□□□□ 0.42
CHMP5-201ENST00000223500 TYMPP19971 482 aa17.68■□□□□ 0.42
CHMP5-201ENST00000223500 WARSP23381 471 aaKnown RBP17.68■□□□□ 0.42
CHMP5-201ENST00000223500 GNL1P36915 607 aaPredicted RBP17.68■□□□□ 0.42
CHMP5-201ENST00000223500 PRKCIP41743 596 aa17.68■□□□□ 0.42
CHMP5-201ENST00000223500 LHX1P48742 406 aa17.68■□□□□ 0.42
CHMP5-201ENST00000223500 SHHQ15465 462 aa17.68■□□□□ 0.42
CHMP5-201ENST00000223500 C9orf50Q5SZB4 431 aa17.68■□□□□ 0.42
CHMP5-201ENST00000223500 E4F1Q66K89 784 aaPredicted RBP17.68■□□□□ 0.42
CHMP5-201ENST00000223500 WDR59Q6PJI9 974 aa17.68■□□□□ 0.42
CHMP5-201ENST00000223500 KCNT2Q6UVM3 1135 aa17.68■□□□□ 0.42
CHMP5-201ENST00000223500 VPS36Q86VN1 386 aa17.68■□□□□ 0.42
CHMP5-201ENST00000223500 PDCL2Q8N4E4 241 aa17.68■□□□□ 0.42
CHMP5-201ENST00000223500 MRPL45Q9BRJ2 306 aaKnown RBP17.68■□□□□ 0.42
CHMP5-201ENST00000223500 NT5C1AQ9BXI3 368 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms