RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 CASKIN2Q8WXE0 1202 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 SLITRK6Q9H5Y7 841 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 VIPAS39Q9H9C1 493 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 PCDHGC3Q9UN70 934 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 A0A0U1RQG5 324 aaPredicted RBP18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 BHMG1C9JSJ3 638 aaPredicted RBP18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 CA12O43570 354 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 PYGMP11217 842 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 AKR1A1P14550 325 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 MMP8P22894 467 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 CARSP49589 748 aaKnown RBP18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 EPHB4P54760 987 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 CDH8P55286 799 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 PCBP1Q15365 356 aaKnown RBP eCLIP18.34■□□□□ 0.531e-6■■■□□ 16.1
RABGGTA-201ENST00000216840 SLC27A1Q6PCB7 646 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 APBB1IPQ7Z5R6 666 aaPredicted RBP18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 KATNAL1Q9BW62 490 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 EIF2AQ9BY44 585 aaKnown RBP18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 SMYD3Q9H7B4 428 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 DPP3Q9NY33 737 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 ITGA11Q9UKX5 1188 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 ABT1Q9ULW3 272 aaKnown RBP18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 AGAP1Q9UPQ3 857 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 MYO1FO00160 1098 aa18.33■□□□□ 0.52
RABGGTA-201ENST00000216840 CDH5P33151 784 aaPredicted RBP18.33■□□□□ 0.52
RABGGTA-201ENST00000216840 PURAQ00577 322 aaKnown RBP18.33■□□□□ 0.52
RABGGTA-201ENST00000216840 C1orf131Q8NDD1 294 aaKnown RBP18.33■□□□□ 0.52
RABGGTA-201ENST00000216840 HPDLQ96IR7 371 aa18.33■□□□□ 0.52
RABGGTA-201ENST00000216840 MRPL47Q9HD33 250 aaKnown RBP18.33■□□□□ 0.52
RABGGTA-201ENST00000216840 ERVK-5Q9HDB9 667 aa18.33■□□□□ 0.52
RABGGTA-201ENST00000216840 SNTG2Q9NY99 539 aa18.33■□□□□ 0.52
RABGGTA-201ENST00000216840 HPCAL4Q9UM19 191 aa18.33■□□□□ 0.52
RABGGTA-201ENST00000216840 C17orf102A2RUQ5 167 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 EIF4BP23588 611 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 SLC1A1P43005 524 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 RAD23BP54727 409 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 RBP5P82980 135 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 LACTBP83111 547 aaPredicted RBP18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 TRADDQ15628 312 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 SEL1L2Q5TEA6 688 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 NOTUMQ6P988 496 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 EMBQ6PCB8 327 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 ADAT2Q7Z6V5 191 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 WDTC1Q8N5D0 677 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 TMEM35BQ8NCS4 154 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 WHAMMQ8TF30 809 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 KIF12Q96FN5 646 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 ZNF518BQ9C0D4 1074 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 ARHGAP39Q9C0H5 1083 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 CXCL16Q9H2A7 254 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 PLEKHA5Q9HAU0 1116 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 CYP3A43Q9HB55 503 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 AMACRQ9UHK6 382 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 SCINQ9Y6U3 715 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 PDCD11Q14690 1871 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 MYADML2A6NDP7 307 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 PROSCO94903 275 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 PAEPP09466 180 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 HOXC8P31273 242 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 RWDD2BP57060 319 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 PAK2Q13177 524 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 SND1Q7KZF4 910 aaKnown RBP eCLIP18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 CCDC26Q8TAB7 109 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 TMEM40Q8WWA1 233 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 IFT81Q8WYA0 676 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 NFU1Q9UMS0 254 aa18.32■□□□□ 0.52
RABGGTA-201ENST00000216840 GOLGA6L10A0A0M3HER8 536 aa18.31■□□□□ 0.52
RABGGTA-201ENST00000216840 H3BQF6 201 aa18.31■□□□□ 0.52
RABGGTA-201ENST00000216840 DUSP11O75319 330 aaKnown RBP18.31■□□□□ 0.52
RABGGTA-201ENST00000216840 CILPO75339 1184 aa18.31■□□□□ 0.52
RABGGTA-201ENST00000216840 STAU1O95793 577 aaKnown RBP18.31■□□□□ 0.52
RABGGTA-201ENST00000216840 CALB1P05937 261 aa18.31■□□□□ 0.52
RABGGTA-201ENST00000216840 HSPA6P17066 643 aa18.31■□□□□ 0.52
RABGGTA-201ENST00000216840 OAS2P29728 719 aaKnown RBP18.31■□□□□ 0.52
RABGGTA-201ENST00000216840 SNX17Q15036 470 aa18.31■□□□□ 0.52
RABGGTA-201ENST00000216840 PPP2R5EQ16537 467 aa18.31■□□□□ 0.52
RABGGTA-201ENST00000216840 CAVIN3Q969G5 261 aa18.31■□□□□ 0.52
RABGGTA-201ENST00000216840 SNX27Q96L92 541 aa18.31■□□□□ 0.52
RABGGTA-201ENST00000216840 TWNKQ96RR1 684 aa18.31■□□□□ 0.52
RABGGTA-201ENST00000216840 PARVAQ9NVD7 372 aa18.31■□□□□ 0.52
RABGGTA-201ENST00000216840 DERAQ9Y315 318 aa18.31■□□□□ 0.52
RABGGTA-201ENST00000216840 SCN1AP35498 2009 aa18.31■□□□□ 0.52
RABGGTA-201ENST00000216840 GJB6O95452 261 aa18.3■□□□□ 0.52
RABGGTA-201ENST00000216840 P4HA1P13674 534 aa18.3■□□□□ 0.52
RABGGTA-201ENST00000216840 CD19P15391 556 aa18.3■□□□□ 0.52
RABGGTA-201ENST00000216840 FCGRTP55899 365 aa18.3■□□□□ 0.52
RABGGTA-201ENST00000216840 DENND1BQ6P3S1 775 aa18.3■□□□□ 0.52
RABGGTA-201ENST00000216840 MAATS1Q7Z4T9 603 aa18.3■□□□□ 0.52
RABGGTA-201ENST00000216840 ZDHHC14Q8IZN3 488 aa18.3■□□□□ 0.52
RABGGTA-201ENST00000216840 SLC4A11Q8NBS3 891 aa18.3■□□□□ 0.52
RABGGTA-201ENST00000216840 FEZF2Q8TBJ5 459 aa18.3■□□□□ 0.52
RABGGTA-201ENST00000216840 ELOVL4Q9GZR5 314 aa18.3■□□□□ 0.52
RABGGTA-201ENST00000216840 HMGXB4Q9UGU5 601 aa18.3■□□□□ 0.52
RABGGTA-201ENST00000216840 GABRQQ9UN88 632 aa18.3■□□□□ 0.52
RABGGTA-201ENST00000216840 TCRBV5S1A1TA0A578 114 aa18.3■□□□□ 0.52
RABGGTA-201ENST00000216840 TTI1O43156 1089 aa18.3■□□□□ 0.52
RABGGTA-201ENST00000216840 CYBAP13498 195 aa18.3■□□□□ 0.52
RABGGTA-201ENST00000216840 AXLP30530 894 aa18.3■□□□□ 0.52
RABGGTA-201ENST00000216840 PSMC4P43686 418 aa18.3■□□□□ 0.52
RABGGTA-201ENST00000216840 ORC1Q13415 861 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms