RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 IVDP26440 423 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 TXNRD3NBQ6F5E7 133 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 HHIPL2Q6UWX4 724 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 SCARA5Q6ZMJ2 495 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 C15orf52Q6ZUT6 534 aaKnown RBP17.69■□□□□ 0.42
CTDP1-201ENST00000075430 GLT8D2Q9H1C3 349 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 RAB20Q9NX57 234 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 CHMP2BQ9UQN3 213 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 FRMPD4Q14CM0 1322 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 PHLPP1O60346 1717 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 ANXA13P27216 316 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 Q4G0T1 1027 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 PPP1R15BQ5SWA1 713 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 KRT39Q6A163 491 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 ACAD10Q6JQN1 1059 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 MFSD7Q6UXD7 560 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 C3orf62Q6ZUJ4 267 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 PPFIBP2Q8ND30 876 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 WDR60Q8WVS4 1066 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 SLC7A6OSQ96CW6 309 aaPredicted RBP17.69■□□□□ 0.42
CTDP1-201ENST00000075430 IGKV6D-41A0A0C4DH26 115 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 ARHGAP42A6NI28 874 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 DCTN3O75935 186 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 STK10O94804 968 aaKnown RBP17.68■□□□□ 0.42
CTDP1-201ENST00000075430 CYP3A7P24462 503 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 CNGA1P29973 690 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 YWHAGP61981 247 aaKnown RBP eCLIP17.68■□□□□ 0.42
CTDP1-201ENST00000075430 PHC3Q8NDX5 983 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 DCAF4Q8WV16 495 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 C1orf112Q9NSG2 853 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 PPARGC1AQ9UBK2 798 aaKnown RBP17.68■□□□□ 0.42
CTDP1-201ENST00000075430 PACSIN3Q9UKS6 424 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 FSCN2O14926 492 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 ORC1Q13415 861 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 STAT4Q14765 748 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 FAXCQ5TGI0 409 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 TRABD2AQ86V40 505 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 AGGF1Q8N302 714 aaeCLIP17.68■□□□□ 0.42
CTDP1-201ENST00000075430 FBXL13Q8NEE6 735 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 PSPC1Q8WXF1 523 aaKnown RBP17.68■□□□□ 0.42
CTDP1-201ENST00000075430 GBP5Q96PP8 586 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 CCDC134Q9H6E4 229 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 ZNF277Q9NRM2 450 aaPredicted RBP17.68■□□□□ 0.42
CTDP1-201ENST00000075430 PRKAG3Q9UGI9 489 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 SCOCQ9UIL1 159 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 PSMD10O75832 226 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 BGNP21810 368 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 ARFIP2P53365 341 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 C1orf220Q5T0J3 134 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 CYP4A22Q5TCH4 519 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 CDCA2Q69YH5 1023 aaPredicted RBP17.68■□□□□ 0.42
CTDP1-201ENST00000075430 MKL1Q969V6 931 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 MECRQ9BV79 373 aa17.68■□□□□ 0.42
CTDP1-201ENST00000075430 IQCGQ9H095 443 aaKnown RBP17.68■□□□□ 0.42
CTDP1-201ENST00000075430 IGLV3-22A0A075B6J6 115 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 F8VP50 259 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 CC2D2BQ6DHV5 1058 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 CCDC62Q6P9F0 684 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 FAM71AQ8IYT1 594 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 USP6NLQ92738 828 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 CD101Q93033 1021 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 MIPEPQ99797 713 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 TMEM39BQ9GZU3 492 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 GGPS1O95749 300 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 PPP2R5CQ13362 524 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 FOXR2Q6PJQ5 311 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 PTPRN2Q92932 1015 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 CNKSR1Q969H4 720 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 THTPAQ9BU02 230 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 CADM1Q9BY67 442 aaKnown RBP17.67■□□□□ 0.42
CTDP1-201ENST00000075430 GLIS2Q9BZE0 524 aaPredicted RBP17.67■□□□□ 0.42
CTDP1-201ENST00000075430 FAM237BA0A1B0GVD1 139 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 MEI4A8MW99 385 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 ASMTLO95671 621 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 RANBP1P43487 201 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 ATXN3P54252 364 aaPredicted RBP17.67■□□□□ 0.42
CTDP1-201ENST00000075430 EPHB1P54762 984 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 NR1H3Q13133 447 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 CLUL1Q15846 466 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 ACSBG2Q5FVE4 666 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 RNF43Q68DV7 783 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 SCARA3Q6AZY7 606 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 ALYREFQ86V81 257 aaKnown RBP17.67■□□□□ 0.42
CTDP1-201ENST00000075430 CYP4F11Q9HBI6 524 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 KCNH7Q9NS40 1196 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 NYAP2Q9P242 653 aa17.67■□□□□ 0.42
CTDP1-201ENST00000075430 B2RBV5 119 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 ATP2A1O14983 1001 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 OPHN1O60890 802 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 UGCGQ16739 394 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 BRDTQ58F21 947 aaPredicted RBP17.66■□□□□ 0.42
CTDP1-201ENST00000075430 FAM43BQ6ZT52 329 aaPredicted RBP17.66■□□□□ 0.42
CTDP1-201ENST00000075430 MCOLN2Q8IZK6 566 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 TCHPQ9BT92 498 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 VCXQ9H320 206 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 DMAC2Q9NW81 257 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 MROH7Q68CQ1 1323 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 FAM155BO75949 473 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 SNUPNO95149 360 aaKnown RBP17.66■□□□□ 0.42
CTDP1-201ENST00000075430 ALADP13716 330 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms