RNA–Protein interactions for RNA: ENST00000039989.8

TTC17-201, Transcript of tetratricopeptide repeat domain 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC17, Length 4,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-201ENST00000039989 SMCHD1A6NHR9 2005 aa11.51□□□□□ -0.57
TTC17-201ENST00000039989 SSU72P8A0A1W2PR75 194 aa11.51□□□□□ -0.57
TTC17-201ENST00000039989 KCTD16Q68DU8 428 aa11.51□□□□□ -0.57
TTC17-201ENST00000039989 WDR59Q6PJI9 974 aa11.51□□□□□ -0.57
TTC17-201ENST00000039989 MTERF4Q7Z6M4 381 aaKnown RBP11.51□□□□□ -0.57
TTC17-201ENST00000039989 CCDC117Q8IWD4 279 aaPredicted RBP11.51□□□□□ -0.57
TTC17-201ENST00000039989 ZNF784Q8NCA9 323 aaPredicted RBP11.51□□□□□ -0.57
TTC17-201ENST00000039989 TRIM11Q96F44 468 aa11.51□□□□□ -0.57
TTC17-201ENST00000039989 TNIP3Q96KP6 325 aa11.51□□□□□ -0.57
TTC17-201ENST00000039989 GPATCH2LQ9NWQ4 482 aa11.51□□□□□ -0.57
TTC17-201ENST00000039989 TUBGCP4Q9UGJ1 667 aa11.51□□□□□ -0.57
TTC17-201ENST00000039989 AMACRQ9UHK6 382 aa11.51□□□□□ -0.57
TTC17-201ENST00000039989 NOC2LQ9Y3T9 749 aaKnown RBP11.51□□□□□ -0.57
TTC17-201ENST00000039989 TRPV2Q9Y5S1 764 aa11.51□□□□□ -0.57
TTC17-201ENST00000039989 RCCD1A6NED2 376 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 DDX3XO00571 662 aaKnown RBP eCLIP11.5□□□□□ -0.571e-9■■■■□ 20.9
TTC17-201ENST00000039989 ALDH7A1P49419 539 aaKnown RBP11.5□□□□□ -0.57
TTC17-201ENST00000039989 RABGGTBP53611 331 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 DCAF4L1Q3SXM0 396 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 SPATA2LQ8IUW3 424 aaPredicted RBP11.5□□□□□ -0.57
TTC17-201ENST00000039989 ADAM32Q8TC27 787 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 TMC2Q8TDI7 906 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 EDEM3Q9BZQ6 932 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 MAD1L1Q9Y6D9 718 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 GOLGA8CPA6NN73 597 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 CAPN15O75808 1086 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 CD4P01730 458 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 SLCO1A2P46721 670 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 AP3M2P53677 418 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 CDH6P55285 790 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 MRPS6P82932 125 aaKnown RBP11.5□□□□□ -0.57
TTC17-201ENST00000039989 CC2D1AQ6P1N0 951 aaPredicted RBP11.5□□□□□ -0.57
TTC17-201ENST00000039989 DARS2Q6PI48 645 aaKnown RBP11.5□□□□□ -0.57
TTC17-201ENST00000039989 KDELC2Q7Z4H8 507 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 WDR49Q8IV35 697 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 HELQQ8TDG4 1101 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 ZNF606Q8WXB4 792 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 SRRDQ9UH36 339 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 NFU1Q9UMS0 254 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 ATP8A1Q9Y2Q0 1164 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 POLR2AP24928 1970 aaKnown RBP11.5□□□□□ -0.57
TTC17-201ENST00000039989 ATP2C2O75185 946 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 HOXD13P35453 343 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 MAP3K7CLP57077 242 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 PSMD6Q15008 389 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 MDH1BQ5I0G3 518 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 TAPT1Q6NXT6 567 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 ARHGAP28Q9P2N2 729 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 GTF3C4Q9UKN8 822 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 TLL2Q9Y6L7 1015 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 C22orf31O95567 290 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 CCDC130P13994 396 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 GTF2F1P35269 517 aaKnown RBP eCLIP11.5□□□□□ -0.571e-8■■□□□ 12.8
TTC17-201ENST00000039989 ARL2P36404 184 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 ADGRF2Q8IZF7 708 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 YME1L1Q96TA2 773 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 RNF39Q9H2S5 420 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 DAAM1Q9Y4D1 1078 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 SCINQ9Y6U3 715 aa11.5□□□□□ -0.57
TTC17-201ENST00000039989 A0A0B4J269 797 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 CALB1P05937 261 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 MCF2P10911 925 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 ARL4AP40617 200 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 TBX2Q13207 712 aaPredicted RBP11.49□□□□□ -0.57
TTC17-201ENST00000039989 MIB1Q86YT6 1006 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 SCUBE3Q8IX30 993 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 NOA1Q8NC60 698 aaKnown RBP11.49□□□□□ -0.57
TTC17-201ENST00000039989 LRRN4CLQ8ND94 238 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 ARHGEF26Q96DR7 871 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 LBHD1Q9BQE6 289 aaPredicted RBP11.49□□□□□ -0.57
TTC17-201ENST00000039989 RSAD1Q9HA92 442 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 TRPC7Q9HCX4 862 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 PADI3Q9ULW8 664 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 ADAMTSL1Q8N6G6 1762 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 WNK3Q9BYP7 1800 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 ANKRD31Q8N7Z5 1873 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 AP1G2O75843 785 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 SAT1P21673 171 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 BRCC3P46736 316 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 CDR2Q01850 454 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 WSCD1Q658N2 575 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 OTOP2Q7RTS6 562 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 PALB2Q86YC2 1186 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 MAP7D3Q8IWC1 876 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 EDEM1Q92611 657 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 RNPC3Q96LT9 517 aaKnown RBP11.49□□□□□ -0.57
TTC17-201ENST00000039989 GOLGA4Q13439 2230 aaKnown RBP11.49□□□□□ -0.57
TTC17-201ENST00000039989 ZNF131P52739 623 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 SDHAF4Q5VUM1 108 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 TTC19Q6DKK2 380 aaPredicted RBP11.49□□□□□ -0.57
TTC17-201ENST00000039989 CCDC63Q8NA47 563 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 NIFKQ9BYG3 293 aaKnown RBP11.49□□□□□ -0.57
TTC17-201ENST00000039989 DDX43Q9NXZ2 648 aaKnown RBP11.49□□□□□ -0.57
TTC17-201ENST00000039989 MROH7Q68CQ1 1323 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 A0A1W2PQJ5 194 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 DARSP14868 501 aaKnown RBP11.49□□□□□ -0.57
TTC17-201ENST00000039989 GGCXP38435 758 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 PTPN11Q06124 597 aaPredicted RBP11.49□□□□□ -0.57
TTC17-201ENST00000039989 BFSP2Q13515 415 aa11.49□□□□□ -0.57
TTC17-201ENST00000039989 KRT71Q3SY84 523 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms