RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 PygmQ9WUB3 842 aaKnown RBP9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Casz1Q9CWL2 1761 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Slc6a16A0A1L1SR47 742 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Rfx8D3YU81 596 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Dsg3O35902 993 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Thap3Q8BJ25 218 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Trim47Q8C0E3 641 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gpc5Q8CAL5 572 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Nemp2Q8CB65 421 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Cdk17Q8K0D0 523 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Nt5c3aQ9D020 331 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ddx21Q9JIK5 851 aaKnown RBP9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Shank2Q80Z38 1476 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Usp31E9Q6Y8 1344 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Osbpl7A2A716 963 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Nfatc2ipO09130 412 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Sesn1P58006 492 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Cops2P61202 443 aaKnown RBP9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Psmc6P62334 389 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 E2f4Q8R0K9 410 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Setd3Q91WC0 594 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Taf11Q99JX1 211 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Spata1Q9D5R4 444 aa9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Rbm6S4R1W5 1118 aaKnown RBP9.66□□□□□ -0.86
Scn8a-213ENSMUST00000201549 PtproE9Q612 1226 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Psd3Q2PFD7 1037 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Rusc1Q8BG26 893 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Chmp2bQ8BJF9 213 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Serpinb10Q8K1K6 397 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 FtcdQ91XD4 541 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gm13084A2A8N0 494 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Apol8A2VDH7 339 aaKnown RBP9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gm379J3QQ19 296 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Trim43bP86448 445 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Psen2Q61144 448 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Lrrc27Q80YS5 523 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Slc25a38Q91XD8 326 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Fuca2Q99KR8 461 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Tmem39aQ9CYC3 486 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Fam111aQ9D2L9 613 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ccdc194A0A140LIT1 234 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Trmt10cQ3UFY8 414 aaKnown RBP9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ugt1a9Q62452 528 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Tmem145Q8C4U2 746 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Rassf9Q8K342 435 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 NclnQ8VCM8 563 aaKnown RBP9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gpsm2Q8VDU0 679 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 PlvapQ91VC4 438 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Patl2A2ARM1 529 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gnrh1P13562 90 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 FntaQ61239 377 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Hao1Q9WU19 370 aa9.65□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Tnip3A0A1D5RMN0 279 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Prl2c2P04095 224 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Stmnd1Q6P3A1 279 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Arhgap26Q6ZQ82 814 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Igdcc3Q8BQC3 813 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ccdc28bQ8CEG5 200 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Sash3Q8K352 380 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Art3Q8R2G4 371 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 AagabQ8R2R3 316 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Tgm5Q9D7I9 724 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Flt1P35969 1333 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Trim5E9PV98 497 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Msh3P13705 1091 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gm10392Q3V3I3 114 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Lemd2Q6DVA0 511 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ldlrap1Q8C142 308 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Dusp19Q8K4T5 220 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ino80bQ99PT3 375 aaKnown RBP9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Thumpd2Q9CZB3 528 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Tmem206Q9D771 350 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Nme3Q9WV85 169 aa9.65□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Epas1P97481 874 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Snai1Q02085 264 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Rrp36Q3UFY0 244 aaKnown RBP9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Rasal3Q8C2K5 1041 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Fbxl13Q8CDU4 790 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Q8CIL4 281 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 HnmtQ91VF2 295 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Nme5Q99MH5 211 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Myh2G3UW82 1942 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gm3264L7N2C5 238 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Eif3dO70194 548 aaKnown RBP9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Map3k10Q66L42 940 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Nxnl1Q8VC33 217 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Retreg1dQ8VE91 480 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 MlphQ91V27 590 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Stk4Q9JI11 487 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Nrg3O35181 713 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Mark2Q05512 776 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 YdjcQ14BV6 310 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gga1Q8R0H9 635 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 ParvaQ9EPC1 372 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Uts2Q9QZQ3 123 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Nphs1Q9QZS7 1256 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Mical3Q8CJ19 1993 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ift172Q6VH22 1749 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Scgb2b7D3YYY1 112 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gm5414Q6IFZ8 552 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms