RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Thnsl1Q8BH55 747 aa12.46□□□□□ -0.42
Trim56-201ENSMUST00000054384 Cyp2c23E9Q5K4 494 aa12.46□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ctnnal1O88327 731 aa12.46□□□□□ -0.42
Trim56-201ENSMUST00000054384 Cd19P25918 547 aa12.46□□□□□ -0.42
Trim56-201ENSMUST00000054384 Wdr35Q8BND3 1181 aa12.46□□□□□ -0.42
Trim56-201ENSMUST00000054384 Foxm1O08696 760 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Angpt2O35608 496 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Aff1O88573 1216 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Galnt3P70419 633 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Trim43cP86449 446 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Tpp2Q64514 1262 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Tdpoz4Q6YCH2 370 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Rhpn2Q8BWR8 686 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ccdc63Q8CDV6 558 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Slfn2Q9Z0I6 378 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Anxa8O35640 327 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Serpina1aP07758 413 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ppm1aP49443 382 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ptgs2Q05769 604 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 MarsQ68FL6 902 aaKnown RBP12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Usp6nlQ80XC3 819 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 RbakQ8BQC8 711 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Adgra1Q8C4G9 578 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Dnajc5gQ8C632 165 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Hspbp1Q99P31 357 aaKnown RBP12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 XpotQ9CRT8 963 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Tmem192Q9CXT7 266 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Gemin5Q8BX17 1502 aaKnown RBP12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Psmc6P62334 389 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Mb21d2Q8C525 428 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Kat2bQ9JHD1 813 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Gabbr1Q9WV18 960 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Cdc42bpgQ80UW5 1551 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Cct8P42932 548 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Anxa5P48036 319 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Cyp2c67Q569X9 491 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Krr1Q8BGA5 380 aaKnown RBP12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Gsta3P30115 221 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ppp4r3cQ3V0Y1 813 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Pdk1Q8BFP9 434 aaKnown RBP12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Cwf19l1Q8CI33 537 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Mtss1Q8R1S4 759 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Rnf8Q8VC56 488 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Serpinb9bQ9DAV6 377 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 IgfalsP70389 603 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Smad5P97454 465 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 2900092C05RikQ5I0V9 184 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Pde1aQ61481 565 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Baiap2l2Q80Y61 522 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Trpv3Q8K424 791 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 TnrQ8BYI9 1358 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Patl2A2ARM1 529 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Trim43bP86448 445 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Serping1P97290 504 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Serpina3mQ03734 418 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 NcaphQ8C156 731 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Syne4Q8CII8 388 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Nsl1Q8K305 281 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Gtse1Q8R080 741 aa12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Med14A2ABV5 1459 aaKnown RBP12.45□□□□□ -0.42
Trim56-201ENSMUST00000054384 Gm7356A0A087WSA6 508 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Akt1P31750 480 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Rbm20Q3UQS8 1199 aaKnown RBP12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Cep295nlQ497N6 533 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Adgrg6Q6F3F9 1165 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Tesk2Q8VCT9 570 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Aldh1b1Q9CZS1 519 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Tex44Q9DA60 530 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Prkab1Q9R078 270 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 RaraP11416 462 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Snx17Q8BVL3 470 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 CalcbQ99MP3 130 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 GakQ99KY4 1305 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ttc30a2A2AKQ8 664 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 R3hdm1E9Q9Q2 1135 aaKnown RBP12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Hps1O08983 704 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 CraddO88843 199 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Samd11Q1RNF8 542 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 SnrpaQ62189 287 aaKnown RBP12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Prr33Q8C494 260 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Olfr397Q8VEZ6 315 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 RerglB2RVE2 204 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Pgk2P09041 417 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ccndbp1Q3TVC7 356 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Fbxo39Q5NBU5 443 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Scd4Q6T707 353 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Xpo6Q924Z6 1125 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Capn7Q9R1S8 813 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Fam47eD3YWC7 402 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Gm6882J3KMT3 313 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Rbp3P49194 1234 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Cyp2j11Q3UNV2 504 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Gm10662Q3UT86 313 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Afg1lQ3V384 480 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ripor1Q68FE6 1223 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Otop3Q80UF9 577 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 NgrnQ99KS2 293 aaKnown RBP12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Mageb16Q9CWV4 363 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 CnpP16330 420 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Lcp1Q61233 627 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms