RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Eif2ak3Q9Z2B5 1114 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gm12394A2AKP6 982 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Cnbd1B1AWM0 430 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Gm281D3Z1Y0 860 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 R3hdm1E9Q9Q2 1135 aaKnown RBP9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Cer1O55233 272 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Rdh7O88451 316 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Slc10a3P21129 473 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Tmprss15P97435 1069 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Rnf113a2Q14B01 337 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 UrgcpQ5NCI0 926 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Tmem199Q5SYH2 208 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Gas8Q60779 478 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Mettl25Q6NXH8 597 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Vwa2Q70UZ7 791 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Tas2r125Q7M710 311 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Slc20a2Q80UP8 656 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Sh3tc2Q80VA5 1289 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Cct8l1Q80YT3 562 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Amz1Q8BVF9 502 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Tada3Q8R0L9 432 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Zdhhc3Q8R173 299 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Slc13a3Q91Y63 600 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Ube2sQ921J4 223 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Pramel1Q99MW3 458 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Rnf14Q9JI90 485 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Adam22Q9R1V6 904 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Trim10Q9WUH5 489 aa9.46□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Gm27029A2A4P4 543 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Dennd5bA2RSQ0 1274 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Gm10110D3Z5M2 615 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Cyp17a1P27786 507 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Bmpr1aP36895 532 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Brcc3P46737 291 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Nrp1P97333 923 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 GaltQ03249 379 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Prss36Q5K2P8 849 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 PrcpQ7TMR0 491 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Akap7Q7TN79 314 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Vat1lQ80TB8 417 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Ints6lQ8BND4 861 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Dis3lQ8C0S1 1053 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Syt15Q8C6N3 418 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Stap2Q8R0L1 411 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Eif4a3Q91VC3 411 aaKnown RBP9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Abcb6Q9DC29 842 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Epm2aQ9WUA5 330 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Hsd17b14E9Q3D4 273 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Kdelc2G5E897 503 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Pbx3O35317 434 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Gp6P0C191 313 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Cetn1P41209 172 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Cdc25cP48967 447 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Ttc39dQ0VF76 604 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Phactr1Q2M3X8 580 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Lrch2Q3UMG5 773 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Rbm20Q3UQS8 1199 aaKnown RBP9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Bbof1Q3V079 533 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 BC051142Q3V0M8 400 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Mrps31Q61733 384 aaKnown RBP9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Atg9bQ6EBV9 922 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 WhrnQ80VW5 918 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Fut11Q8BHC9 489 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Maip1Q8BHE8 291 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Pum3Q8BKS9 647 aaKnown RBP9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Abraxas1Q8BPZ8 407 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Mei4Q8BRM6 389 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Lig4Q8BTF7 911 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Brat1Q8C3R1 822 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Timd2Q8R183 305 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Uroc1Q8VC12 676 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Pip4k2cQ91XU3 421 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Fam187aQ9D3R5 417 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Noxred1Q9D3S5 366 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Znf106O88466 1888 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Plxna4Q80UG2 1893 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Myo7aP97479 2215 aa9.45□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Scgb2b11A0A087WR49 112 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 4930402K13RikB1AW18 415 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Ppfia4B8QI36 1187 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Spata31d1dE9Q5W2 1247 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 XntrpcF8VQM8 1264 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Vmn2r19G5E8G4 854 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Scgb2b19J3QM75 112 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Top6blJ3QMY9 579 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 PurbO35295 324 aaKnown RBP9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 DcxO88809 366 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Fgfr1P16092 822 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Gp1bbP56400 206 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Ripply1Q2WG77 201 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 March5Q3KNM2 278 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Ppp4r3cQ3V0Y1 813 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Taf3Q5HZG4 932 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Lamb3Q61087 1168 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Polr2eQ80UW8 210 aaKnown RBP9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 EmsyQ8BMB0 1264 aaKnown RBP9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Rd3Q8BRE0 195 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Fam163bQ8BUM6 167 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Clec1aQ8BWY2 269 aa9.44□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Ftsj1Q8CBC7 324 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms