RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Scyl3Q9DBQ7 735 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Rnf103Q9R1W3 683 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 PfkpQ9WUA3 784 aaKnown RBP10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Lrp6O88572 1613 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Kndc1Q0KK55 1742 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Oip5A2AQ14 241 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Olfr310B2RVZ1 332 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Kif6E9PX57 802 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Tal1P22091 329 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Usp10P52479 792 aaKnown RBP10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Eif3eP60229 445 aaKnown RBP10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 PrcpQ7TMR0 491 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Olfr397Q8VEZ6 315 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 FdpsQ920E5 353 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Rassf3Q99P51 232 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 PpihQ9D868 188 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 DcpsQ9DAR7 338 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Pdk2Q9JK42 407 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ptf1aQ9QX98 324 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Abt1Q9QYL7 269 aaKnown RBP10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Dnajc12Q9R022 198 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gm3371F7CQW8 167 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Hmgxb3G3X9M3 1254 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Hcn2O88703 863 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 PtpraP18052 829 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Rab17P35292 214 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Muc1Q02496 630 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Dsg1aQ61495 1057 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 HiraQ61666 1015 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Hsph1Q61699 858 aaKnown RBP10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ago4Q8CJF8 861 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ago2Q8CJG0 860 aaKnown RBP10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Rassf9Q8K342 435 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Pcdha5Q91Y15 934 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Cep72Q9D3R3 646 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ubxn11Q9D572 484 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ttc33Q9D6K7 262 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Nr1h3Q9Z0Y9 445 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Vmn2r87E9PZX4 848 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gm3460E9QAI8 215 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Akr1b10G5E895 316 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Klc2O88448 599 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 CfhP06909 1234 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Hipk4Q3V016 616 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 PnocQ64387 187 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Tdpoz4Q6YCH2 370 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Wnk4Q80UE6 1222 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Dnph1Q80VJ3 173 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Pum3Q8BKS9 647 aaKnown RBP10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Senp7Q8BUH8 1037 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ipo11Q8K2V6 975 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ccdc92Q8VDN4 314 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ddx56Q9D0R4 546 aaKnown RBP10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Rab11fip1Q9D620 645 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ube4bQ9ES00 1173 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Pcsk1nQ9QXV0 258 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Atp11cQ9QZW0 1129 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Hebp1Q9R257 190 aa10.41□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gm4307E9PZY4 289 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gm4312K9J7E2 289 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Trappc3O55013 180 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Akr1b7P21300 316 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Hmgcs2P54869 508 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Rrp36Q3UFY0 244 aaKnown RBP10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Klhdc9Q3USL1 350 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Tfdp2Q64163 446 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Akap7Q7TN79 314 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Atg4cQ811C2 458 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Cwf19l2Q8BG79 887 aaKnown RBP10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 OafQ8QZR4 282 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gimap3Q99MI6 301 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Grk2Q99MK8 689 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Mccc1Q99MR8 717 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 NenfQ9CQ45 171 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Tnni1Q9WUZ5 187 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Znf609Q8BZ47 1413 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Oog1E9Q5G7 496 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gcnt4E9Q649 455 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ppef2O35385 757 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Pja1O55176 578 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Cdc25cP48967 447 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Pms2P54279 859 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Serping1P97290 504 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Slc24a2Q14BI1 711 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Wdr36Q3TAQ9 899 aaKnown RBP10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ccndbp1Q3TVC7 356 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Atp13a5Q3TYU2 1216 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gm4981Q3ULJ8 291 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Als2clQ60I26 952 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gja3Q64448 417 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 GapdhsQ64467 440 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Raver2Q7TPD6 673 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Znf598Q80YR4 908 aaKnown RBP10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Entpd3Q8BFW6 529 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 DaglbQ91WC9 669 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Mrpl4Q9DCU6 294 aaKnown RBP10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Chek2Q9Z265 546 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Myh1Q5SX40 1942 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gm29554A0A087WNW4 188 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 PrkceP16054 737 aa10.4□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms