RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Spire2Q8K1S6 718 aa17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Thumpd2Q9CZB3 528 aa17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Vnn1Q9Z0K8 512 aa17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Gm3187M0QWW3 260 aa17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 PigrO70570 771 aa17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Sh3tc2Q80VA5 1289 aa17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Kctd3Q8BFX3 815 aa17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Phf23Q8BSN5 401 aa17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Actl9Q8CG27 415 aa17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Maged2Q9ER67 616 aa17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Kat2bQ9JHD1 813 aa17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 C87977A2A958 498 aa17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Kifc3O35231 824 aa17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Vav1P27870 845 aa17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Gja6Q6S5G4 283 aa17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Stxbp5Q8K400 1152 aaKnown RBP17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Stx19Q8R1Q0 292 aa17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Zbed3Q9D0L1 228 aa17.48■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Gm3182K7N6T8 263 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 PolgP54099 1218 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 ItgaeQ60677 1167 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Gcfc2Q8BKT3 769 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 TbckQ8BM85 762 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Kiaa0391Q8JZY4 584 aaKnown RBP17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Dppa3Q8QZY3 150 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 GaleQ8R059 347 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Rmnd5bQ91YQ7 393 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Wdr12Q9JJA4 423 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Gm3893E9Q1I1 302 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Gm5134E9QAB5 671 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Mgat1P27808 447 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 NyxP83503 476 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Lcn3Q62471 182 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Brsk2Q69Z98 735 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 PccaQ91ZA3 724 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Ccdc194A0A140LIT1 234 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Nmt1O70310 496 aaKnown RBP17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Rtn2O70622 471 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Prox1P48437 737 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Erp29P57759 262 aaKnown RBP17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Usp46P62069 366 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Nkx2-3P97334 362 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 BC051142Q3V0M8 400 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Ubxn7Q6P5G6 467 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Osbpl2Q8BX94 484 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Taf6lQ8R2K4 616 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Nme5Q99MH5 211 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Klra10Q9R1G6 266 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Adamts7Q68SA9 1657 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Gm4985A2ALC6 410 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Adam15O88839 864 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Frmd8Q3UFK8 466 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Q5EBG8 199 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Sp8Q8BMJ8 486 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Rhobtb3Q9CTN4 611 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Pcsk1nQ9QXV0 258 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Smok2bQ9QYZ3 484 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Smok2aQ9QYZ6 504 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Qser1A2BIE1 1698 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Arhgap22Q8BL80 702 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Borcs5Q9D920 195 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Gadd45gQ9Z111 159 aa17.47■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Gm3636E9Q5P1 227 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 NfixP70257 488 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Shcbp1lQ3TTP0 639 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Krt76Q3UV17 594 aaKnown RBP17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Myo19Q5SV80 963 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Dlgap2Q8BJ42 1059 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 CalcbQ99MP3 130 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Rmdn1Q9DCV4 305 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 GakQ99KY4 1305 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Akr1b1P45376 316 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Mmp14P53690 582 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 E2f8Q58FA4 860 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Ireb2Q811J3 963 aaKnown RBP17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Dcun1d2Q8BZJ7 259 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Q8K2W9 541 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Chit1Q9D7Q1 464 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Ptk2P34152 1090 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Trnau1apQ80VC6 287 aaKnown RBP17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Trex1Q91XB0 314 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Akap8lQ9R0L7 642 aaKnown RBP17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Anapc7Q9WVM3 565 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Abcb5B5X0E4 1255 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Gsta3P30115 221 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Pkn1P70268 946 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 RelaQ04207 549 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 XiapQ60989 496 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Plk4Q64702 925 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Nyap1Q6PFX7 833 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Best2Q8BGM5 508 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 E4f1Q8CCE9 783 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Pcdhb7Q8CDY9 829 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Dnajc7Q9QYI3 494 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Zbtb18Q9WUK6 522 aa17.46■□□□□ 0.39
Col17a1-201ENSMUST00000026045 Mybpc1D3YU50 1127 aa17.45■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Ccdc51Q3URS9 406 aa17.45■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Nutm2Q3V0C3 733 aa17.45■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Trim67Q505D9 768 aa17.45■□□□□ 0.38
Col17a1-201ENSMUST00000026045 BegainQ68EF6 600 aa17.45■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms