RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Ccnd2P30280 289 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Pon1P52430 355 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Cyth2P63034 400 aaKnown RBP11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Nfe2Q07279 373 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 FancbQ5XJY6 703 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 PrcpQ7TMR0 491 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 C2cd2lQ80X80 706 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ubap1Q8BH48 502 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Lrrc24Q8BHA1 521 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Psmd5Q8BJY1 504 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Pum3Q8BKS9 647 aaKnown RBP11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Hsdl1Q8BTX9 330 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Efl1Q8C0D5 1127 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Spdl1Q923A2 608 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Znf687Q9D2D7 1237 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rexo2Q9D8S4 237 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Stk4Q9JI11 487 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Anapc7Q9WVM3 565 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Nr1h3Q9Z0Y9 445 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Slc8a3S4R2P9 928 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Efna5O08543 228 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 MafgO54790 162 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 SarsP26638 512 aaKnown RBP11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ptk2P34152 1090 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Atp9bP98195 1146 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 9130409I23RikQ3TS87 320 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Hace1Q3U0D9 909 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Klra5Q60652 266 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Oca2Q62052 833 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Mcf2lQ64096 1149 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Olfr1415Q7TQS4 311 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Znf579Q80VM4 562 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Tdp1Q8BJ37 609 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ppp4r4Q8C0Y0 875 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Abi1Q8CBW3 481 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Trip10Q8CJ53 603 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Olfr1416Q8VGU4 312 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Tti1Q91V83 1085 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 MajinQ9D992 256 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Slc13a1Q9JHI4 594 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Olig1Q9JKN5 260 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Gm6657A0A1B0GRJ3 277 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Spata31E9QAF0 1014 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Gm21962L7N280 338 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 AfpP02772 605 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rab21P35282 222 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 4930502E18RikQ14BQ3 236 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Gm1604bQ3TRG0 118 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Olfm4Q3UZZ4 505 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Cage1Q5IR70 849 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Klra6Q60653 266 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Map3k7Q62073 579 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Usp8Q80U87 1080 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Pan2Q8BGF7 1200 aaKnown RBP11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Slc9b1Q8C0X2 565 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Tmem145Q8C4U2 746 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Tbc1d22aQ8R5A6 516 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Cyp39a1Q9JKJ9 470 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Gm7995L7N2E4 160 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Lrp6O88572 1613 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Lta4hP24527 611 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rab20P35295 233 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 rp9P97762 213 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Atp4aQ64436 1033 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Tpp2Q64514 1262 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ahcyl1Q80SW1 530 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Amz1Q8BVF9 502 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Lonp1Q8CGK3 949 aaKnown RBP11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ccdc137Q8R0K4 290 aaKnown RBP11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Vav3Q9R0C8 847 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Diaph3Q9Z207 1171 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Lactbl1S4R213 581 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Gm7086A0A1W2P766 342 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Mroh7A2AVR2 1279 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Dsg3O35902 993 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Lzts1P60853 599 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Srrm1Q52KI8 946 aaKnown RBP11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rgl2Q61193 778 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 E2f5Q61502 335 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Kcnt1Q6ZPR4 1224 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rnf139Q7TMV1 668 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Cabs1Q8C633 391 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Coq6Q8R1S0 476 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Zcchc18Q8VD24 393 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Them5Q9CQJ0 248 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 4933428M09RikQ9D3X3 192 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Iqcf1Q9D9K8 182 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Itgb1bp2Q9R000 350 aa11.43□□□□□ -0.58
Msh3-201ENSMUST00000022220 Smim10l2aA0A0B4J1F8 78 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Alkbh1P0CB42 389 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Myl6Q60605 151 aaKnown RBP11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Fndc3aQ8BX90 1198 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 A430089I19RikQ8C9W1 407 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Caap1Q8VDY9 356 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Med7Q9CZB6 233 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rap1gapA2ALS5 663 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Olfr1354E9Q5G9 310 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Gm3371F7CQW8 167 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Per2O54943 1257 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Msh2P43247 935 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms