RNA–Protein interactions for RNA: YPR175W

DPB2, Transcript of Second largest subunit of DNA polymerase II (DNA polymerase epsilon), yeast

Gene DPB2, Length 2,070 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB2	YPR175W	YET3	Q07451	203 aa		4.29	□□□□□ -1.72
DPB2	YPR175W	HIS3	P06633	220 aa		4.28	□□□□□ -1.72
DPB2	YPR175W	TAH1	P25638	111 aa	Predicted RBP	4.28	□□□□□ -1.72
DPB2	YPR175W	RCN1	P36054	211 aa		4.28	□□□□□ -1.72
DPB2	YPR175W	UTP30	P36144	274 aa	Known RBP	4.28	□□□□□ -1.72
DPB2	YPR175W	CAT8	P39113	1433 aa		4.28	□□□□□ -1.72
DPB2	YPR175W	IML1	P47170	1584 aa		4.28	□□□□□ -1.72
DPB2	YPR175W	CAB4	P53332	305 aa		4.28	□□□□□ -1.72
DPB2	YPR175W	YOL024W	Q08172	172 aa		4.28	□□□□□ -1.72
DPB2	YPR175W	BBP1	Q12365	385 aa		4.28	□□□□□ -1.72
DPB2	YPR175W	IGO2	Q9P305	131 aa		4.28	□□□□□ -1.72
DPB2	YPR175W	NUP188	P52593	1655 aa	Known RBP	4.28	□□□□□ -1.72
DPB2	YPR175W	SEC17	P32602	292 aa		4.28	□□□□□ -1.72
DPB2	YPR175W	YER076C	P40049	302 aa		4.28	□□□□□ -1.72
DPB2	YPR175W	ABF2	Q02486	183 aa		4.28	□□□□□ -1.72
DPB2	YPR175W	TDA8	Q6B2U8	126 aa		4.28	□□□□□ -1.72
DPB2	YPR175W	ARO7	P32178	256 aa		4.27	□□□□□ -1.73
DPB2	YPR175W	COG5	P53951	403 aa		4.27	□□□□□ -1.73
DPB2	YPR175W	YNL010W	P53981	241 aa	Known RBP	4.27	□□□□□ -1.73
DPB2	YPR175W	BRX1	Q08235	291 aa	Known RBP	4.27	□□□□□ -1.73
DPB2	YPR175W	YOR283W	Q12040	230 aa	Known RBP	4.27	□□□□□ -1.73
DPB2	YPR175W	AST2	P39945	430 aa	Known RBP	4.26	□□□□□ -1.73
DPB2	YPR175W	PIR5	P46999	287 aa		4.26	□□□□□ -1.73
DPB2	YPR175W	GAS3	Q03655	524 aa		4.26	□□□□□ -1.73
DPB2	YPR175W	LSO2	Q3E772	92 aa	Known RBP	4.26	□□□□□ -1.73
DPB2	YPR175W	YBR063C	P38083	404 aa		4.26	□□□□□ -1.73
DPB2	YPR175W	RSM27	P53305	110 aa		4.26	□□□□□ -1.73
DPB2	YPR175W	YPL257W	Q08974	193 aa		4.26	□□□□□ -1.73
DPB2	YPR175W	YFR032C-B	Q8TGU2	87 aa		4.26	□□□□□ -1.73
DPB2	YPR175W	HAP1	P0CE41	1502 aa		4.25	□□□□□ -1.73
DPB2	YPR175W	MRPS9	P38120	278 aa		4.25	□□□□□ -1.73
DPB2	YPR175W	YER084W	P40057	128 aa		4.25	□□□□□ -1.73
DPB2	YPR175W	RPS23A	P0CX29	145 aa	Known RBP	4.25	□□□□□ -1.73
DPB2	YPR175W	RPS23B	P0CX30	145 aa		4.25	□□□□□ -1.73
DPB2	YPR175W	APJ1	P53940	528 aa		4.25	□□□□□ -1.73
DPB2	YPR175W	YOR020W-A	Q3E824	90 aa		4.25	□□□□□ -1.73
DPB2	YPR175W	FCY2	P17064	533 aa		4.24	□□□□□ -1.73
DPB2	YPR175W	CNB1	P25296	175 aa		4.24	□□□□□ -1.73
DPB2	YPR175W	PDS1	P40316	373 aa	Predicted RBP	4.24	□□□□□ -1.73
DPB2	YPR175W	GON7	P46984	123 aa		4.24	□□□□□ -1.73
DPB2	YPR175W	YPR170W-B	P0C5R9	85 aa		4.23	□□□□□ -1.73
DPB2	YPR175W	ICE2	P40499	491 aa		4.23	□□□□□ -1.73
DPB2	YPR175W	FLC3	P53121	802 aa		4.23	□□□□□ -1.73
DPB2	YPR175W	RTC4	P53850	401 aa		4.23	□□□□□ -1.73
DPB2	YPR175W	TRM12	Q04235	462 aa		4.23	□□□□□ -1.73
DPB2	YPR175W	TKL2	P33315	681 aa		4.23	□□□□□ -1.73
DPB2	YPR175W	FMP23	P38231	175 aa		4.23	□□□□□ -1.73
DPB2	YPR175W	COS8	P38723	381 aa		4.23	□□□□□ -1.73
DPB2	YPR175W	ECO1	P43605	281 aa		4.23	□□□□□ -1.73
DPB2	YPR175W	REP2	P03872	296 aa		4.22	□□□□□ -1.73
DPB2	YPR175W	RPL25	P04456	142 aa	Known RBP	4.22	□□□□□ -1.73
DPB2	YPR175W	YDR249C	Q03787	373 aa		4.22	□□□□□ -1.73
DPB2	YPR175W	YPR063C	Q12160	140 aa		4.22	□□□□□ -1.73
DPB2	YPR175W	TRX3	P25372	127 aa		4.22	□□□□□ -1.73
DPB2	YPR175W	MEI4	P29467	408 aa		4.22	□□□□□ -1.73
DPB2	YPR175W	ACP1	P32463	125 aa		4.22	□□□□□ -1.73
DPB2	YPR175W	ARP3	P47117	449 aa	Known RBP	4.22	□□□□□ -1.73
DPB2	YPR175W	ATG39	Q06159	398 aa		4.22	□□□□□ -1.73
DPB2	YPR175W	YPL162C	Q12042	273 aa		4.22	□□□□□ -1.73
DPB2	YPR175W	MCP1	Q12106	302 aa		4.22	□□□□□ -1.73
DPB2	YPR175W	MDM32	Q12171	622 aa		4.22	□□□□□ -1.73
DPB2	YPR175W	PSF1	Q12488	208 aa		4.22	□□□□□ -1.73
DPB2	YPR175W	VMR1	P38735	1592 aa		4.21	□□□□□ -1.73
DPB2	YPR175W	GEA1	P47102	1408 aa	Predicted RBP	4.21	□□□□□ -1.74
DPB2	YPR175W	Q0255	P03881	472 aa		4.21	□□□□□ -1.74
DPB2	YPR175W	SIR2	P06700	562 aa		4.21	□□□□□ -1.74
DPB2	YPR175W	OST2	P46964	130 aa		4.21	□□□□□ -1.74
DPB2	YPR175W	AGA2	P32781	87 aa		4.2	□□□□□ -1.74
DPB2	YPR175W	YHR125W	P38831	101 aa		4.2	□□□□□ -1.74
DPB2	YPR175W	HMF1	P40037	129 aa	Known RBP	4.2	□□□□□ -1.74
DPB2	YPR175W	YLR156W	P0CE96	114 aa		4.2	□□□□□ -1.74
DPB2	YPR175W	YLR159W	P0CE97	114 aa		4.2	□□□□□ -1.74
DPB2	YPR175W	YLR161W	P0CE98	114 aa		4.2	□□□□□ -1.74
DPB2	YPR175W	YGP1	P38616	354 aa	Known RBP	4.2	□□□□□ -1.74
DPB2	YPR175W	FIS1	P40515	155 aa		4.2	□□□□□ -1.74
DPB2	YPR175W	YLR036C	Q07986	203 aa		4.2	□□□□□ -1.74
DPB2	YPR175W	NVJ1	P38881	321 aa		4.19	□□□□□ -1.74
DPB2	YPR175W	RPL9A	P05738	191 aa	Known RBP	4.18	□□□□□ -1.74
DPB2	YPR175W	QCR2	P07257	368 aa		4.18	□□□□□ -1.74
DPB2	YPR175W	YHR032W-A	P0C5N6	59 aa		4.18	□□□□□ -1.74
DPB2	YPR175W	MAG1	P22134	296 aa	Known RBP	4.18	□□□□□ -1.74
DPB2	YPR175W	RMD6	P39975	231 aa		4.18	□□□□□ -1.74
DPB2	YPR175W	RPL9B	P51401	191 aa	Known RBP	4.18	□□□□□ -1.74
DPB2	YPR175W	YMD8	Q03697	442 aa		4.18	□□□□□ -1.74
DPB2	YPR175W	YML108W	Q03759	105 aa		4.18	□□□□□ -1.74
DPB2	YPR175W	TMA22	P47089	198 aa	Predicted RBP	4.18	□□□□□ -1.74
DPB2	YPR175W	PET9	P18239	318 aa	Known RBP	4.17	□□□□□ -1.74
DPB2	YPR175W	MGT1	P26188	188 aa		4.17	□□□□□ -1.74
DPB2	YPR175W	POP4	P38336	279 aa		4.17	□□□□□ -1.74
DPB2	YPR175W	MBF1	O14467	151 aa	Known RBP	4.17	□□□□□ -1.74
DPB2	YPR175W	YAR068W	P39564	161 aa		4.17	□□□□□ -1.74
DPB2	YPR175W	MTW1	P39731	289 aa		4.17	□□□□□ -1.74
DPB2	YPR175W	ARC15	P40518	154 aa	RIP-Chip data	4.17	□□□□□ -1.74	not detected
DPB2	YPR175W	HSK3	P69852	69 aa		4.17	□□□□□ -1.74
DPB2	YPR175W	NUP49	Q02199	472 aa		4.17	□□□□□ -1.74
DPB2	YPR175W	FIG1	P38224	298 aa		4.16	□□□□□ -1.74
DPB2	YPR175W	YJR111C	P47148	283 aa	Known RBP	4.16	□□□□□ -1.74
DPB2	YPR175W	SWP1	Q02795	286 aa		4.16	□□□□□ -1.74
DPB2	YPR175W	YLR050C	Q12155	161 aa	Known RBP	4.16	□□□□□ -1.74
DPB2	YPR175W	YGL235W	P53071	178 aa		4.15	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms