RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeast

Gene YOP1, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YOP1	YPR028W	FPR1	P20081	114 aa	Known RBP	0.83	□□□□□ -2.28
YOP1	YPR028W	TAF14	P35189	244 aa		0.83	□□□□□ -2.28
YOP1	YPR028W	YCR087C-A	P37263	153 aa		0.83	□□□□□ -2.28
YOP1	YPR028W	HMF1	P40037	129 aa	Known RBP	0.83	□□□□□ -2.28
YOP1	YPR028W	ERJ5	P43613	295 aa	Predicted RBP	0.83	□□□□□ -2.28
YOP1	YPR028W	YMR226C	Q05016	267 aa	Known RBP	0.83	□□□□□ -2.28
YOP1	YPR028W	YHR214C-E	Q8TGK0	99 aa		0.83	□□□□□ -2.28
YOP1	YPR028W	YFR032C-B	Q8TGU2	87 aa		0.83	□□□□□ -2.28
YOP1	YPR028W	HTB1	P02293	131 aa	Known RBP	0.82	□□□□□ -2.28
YOP1	YPR028W	HTB2	P02294	131 aa		0.82	□□□□□ -2.28
YOP1	YPR028W	RPL2A	P0CX45	254 aa	Known RBP	0.82	□□□□□ -2.28
YOP1	YPR028W	RPL2B	P0CX46	254 aa	Known RBP	0.82	□□□□□ -2.28
YOP1	YPR028W	CKS1	P20486	150 aa	Known RBP	0.82	□□□□□ -2.28
YOP1	YPR028W	SPS18	P32572	300 aa		0.82	□□□□□ -2.28
YOP1	YPR028W	UPS2	P35200	230 aa		0.82	□□□□□ -2.28
YOP1	YPR028W	GLE2	P40066	365 aa		0.82	□□□□□ -2.28
YOP1	YPR028W	CUS2	P53830	285 aa	Predicted RBP	0.82	□□□□□ -2.28
YOP1	YPR028W	POP3	P53833	195 aa	Predicted RBP	0.82	□□□□□ -2.28
YOP1	YPR028W	YDR274C	P87283	123 aa		0.82	□□□□□ -2.28
YOP1	YPR028W	NUP49	Q02199	472 aa		0.82	□□□□□ -2.28
YOP1	YPR028W	PET191	Q02772	108 aa		0.82	□□□□□ -2.28
YOP1	YPR028W	MRPS17	Q03246	237 aa	Predicted RBP	0.82	□□□□□ -2.28
YOP1	YPR028W	CWC21	Q03375	135 aa	Known RBP	0.82	□□□□□ -2.28
YOP1	YPR028W	YNG1	Q08465	219 aa		0.82	□□□□□ -2.28
YOP1	YPR028W	YRA1	Q12159	226 aa	Known RBP	0.82	□□□□□ -2.28
YOP1	YPR028W	RIO1	Q12196	484 aa	Known RBP	0.82	□□□□□ -2.28
YOP1	YPR028W	YDL180W	Q12301	547 aa		0.82	□□□□□ -2.28
YOP1	YPR028W	YLR236C	A0A023PZG4	107 aa		0.81	□□□□□ -2.28
YOP1	YPR028W	CDC36	P06100	191 aa	Predicted RBP	0.81	□□□□□ -2.28
YOP1	YPR028W	SIR2	P06700	562 aa		0.81	□□□□□ -2.28
YOP1	YPR028W	CPA1	P07258	411 aa	Known RBP	0.81	□□□□□ -2.28
YOP1	YPR028W	QCR8	P08525	94 aa		0.81	□□□□□ -2.28
YOP1	YPR028W	ATP15	P21306	62 aa		0.81	□□□□□ -2.28
YOP1	YPR028W	RFA3	P26755	122 aa	Known RBP	0.81	□□□□□ -2.28
YOP1	YPR028W	YKT6	P36015	200 aa	Known RBP	0.81	□□□□□ -2.28
YOP1	YPR028W	TVP38	P36164	337 aa		0.81	□□□□□ -2.28
YOP1	YPR028W	RFC4	P40339	323 aa	Known RBP	0.81	□□□□□ -2.28
YOP1	YPR028W	KNH1	P50112	268 aa		0.81	□□□□□ -2.28
YOP1	YPR028W	CGR1	P53188	120 aa		0.81	□□□□□ -2.28
YOP1	YPR028W	CUE4	Q04201	117 aa	Predicted RBP	0.81	□□□□□ -2.28
YOP1	YPR028W	YOL160W	Q08321	113 aa		0.81	□□□□□ -2.28
YOP1	YPR028W	IKI3	Q06706	1349 aa	Known RBP	0.81	□□□□□ -2.28
YOP1	YPR028W	RPL27A	P0C2H6	136 aa	Known RBP	0.8	□□□□□ -2.28
YOP1	YPR028W	CBF1	P17106	351 aa		0.8	□□□□□ -2.28
YOP1	YPR028W	KDX1	P36005	433 aa		0.8	□□□□□ -2.28
YOP1	YPR028W	AIM25	P47140	327 aa		0.8	□□□□□ -2.28
YOP1	YPR028W	HNT1	Q04344	158 aa	Known RBP	0.8	□□□□□ -2.28
YOP1	YPR028W	FUS2	Q05670	677 aa		0.8	□□□□□ -2.28
YOP1	YPR028W	ODC2	Q99297	307 aa		0.8	□□□□□ -2.28
YOP1	YPR028W	MATALPHA2	P0CY08	210 aa		0.79	□□□□□ -2.28
YOP1	YPR028W	HMLALPHA2	P0CY09	210 aa		0.79	□□□□□ -2.28
YOP1	YPR028W	CNB1	P25296	175 aa		0.79	□□□□□ -2.28
YOP1	YPR028W	YCR090C	P25654	182 aa	Known RBP	0.79	□□□□□ -2.28
YOP1	YPR028W	OPY1	P38271	328 aa		0.79	□□□□□ -2.28
YOP1	YPR028W	GET1	P53192	235 aa		0.79	□□□□□ -2.28
YOP1	YPR028W	GGA1	Q06336	557 aa		0.79	□□□□□ -2.28
YOP1	YPR028W	ABP140	Q08641	628 aa	Known RBP	0.79	□□□□□ -2.28
YOP1	YPR028W	RAD28	Q12021	506 aa		0.79	□□□□□ -2.28
YOP1	YPR028W	GET4	Q12125	312 aa		0.79	□□□□□ -2.28
YOP1	YPR028W	JIP3	O13555	125 aa		0.78	□□□□□ -2.28
YOP1	YPR028W	MBF1	O14467	151 aa	Known RBP	0.78	□□□□□ -2.28
YOP1	YPR028W	MRS1	P07266	363 aa		0.78	□□□□□ -2.28
YOP1	YPR028W	SEC11	P15367	167 aa		0.78	□□□□□ -2.28
YOP1	YPR028W	OCH1	P31755	480 aa		0.78	□□□□□ -2.28
YOP1	YPR028W	ASF2	P32448	525 aa	Predicted RBP	0.78	□□□□□ -2.28
YOP1	YPR028W	ECM4	P36156	370 aa		0.78	□□□□□ -2.28
YOP1	YPR028W	AIM2	P39721	246 aa		0.78	□□□□□ -2.28
YOP1	YPR028W	YER034W	P40022	185 aa	Known RBP	0.78	□□□□□ -2.28
YOP1	YPR028W	YER076C	P40049	302 aa		0.78	□□□□□ -2.28
YOP1	YPR028W	ERG10	P41338	398 aa	Known RBP	0.78	□□□□□ -2.28
YOP1	YPR028W	MMS2	P53152	137 aa		0.78	□□□□□ -2.28
YOP1	YPR028W	MPA43	P53583	542 aa	Predicted RBP	0.78	□□□□□ -2.28
YOP1	YPR028W	UBC7	Q02159	165 aa		0.78	□□□□□ -2.28
YOP1	YPR028W	DYN3	Q04949	312 aa		0.78	□□□□□ -2.28
YOP1	YPR028W	YHR007C-A	Q07074	71 aa		0.78	□□□□□ -2.28
YOP1	YPR028W	ADF1	Q2V2Q1	113 aa		0.78	□□□□□ -2.28
YOP1	YPR028W	YCL012C	Q8J0M4	134 aa		0.78	□□□□□ -2.28
YOP1	YPR028W	YPK2	P18961	677 aa		0.77	□□□□□ -2.29
YOP1	YPR028W	SPO13	P23624	291 aa		0.77	□□□□□ -2.29
YOP1	YPR028W	PAN3	P36102	679 aa	Predicted RBP	0.77	□□□□□ -2.29
YOP1	YPR028W	VMA22	P38784	181 aa		0.77	□□□□□ -2.29
YOP1	YPR028W	TVP23	P38962	199 aa		0.77	□□□□□ -2.29
YOP1	YPR028W	YEA4	P40004	342 aa		0.77	□□□□□ -2.29
YOP1	YPR028W	YER134C	P40081	178 aa		0.77	□□□□□ -2.29
YOP1	YPR028W	RIO2	P40160	425 aa	Known RBP	0.77	□□□□□ -2.29
YOP1	YPR028W	SKI6	P46948	246 aa	Predicted RBP	0.77	□□□□□ -2.29
YOP1	YPR028W	MPC3	P53311	146 aa		0.77	□□□□□ -2.29
YOP1	YPR028W	NOP19	P53317	196 aa	Predicted RBP	0.77	□□□□□ -2.29
YOP1	YPR028W	YPR174C	Q06616	221 aa	Predicted RBP	0.77	□□□□□ -2.29
YOP1	YPR028W	DGA1	Q08650	418 aa		0.77	□□□□□ -2.29
YOP1	YPR028W	YNL146C-A	Q3E7Z1	64 aa		0.77	□□□□□ -2.29
YOP1	YPR028W	MSB2	P32334	1306 aa		0.77	□□□□□ -2.29
YOP1	YPR028W	QCR7	P00128	127 aa		0.76	□□□□□ -2.29
YOP1	YPR028W	POR1	P04840	283 aa	Known RBP	0.76	□□□□□ -2.29
YOP1	YPR028W	FLX1	P40464	311 aa		0.76	□□□□□ -2.29
YOP1	YPR028W	SER2	P42941	309 aa		0.76	□□□□□ -2.29
YOP1	YPR028W	ARP3	P47117	449 aa	Known RBP	0.76	□□□□□ -2.29
YOP1	YPR028W	YAE1	P47118	141 aa	Predicted RBP	0.76	□□□□□ -2.29
YOP1	YPR028W	RCE1	Q03530	315 aa		0.76	□□□□□ -2.29
YOP1	YPR028W	YMR295C	Q03559	197 aa		0.76	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms