RNA–Protein interactions for RNA: YPL115C

BEM3, Transcript of Rho GTPase activating protein (RhoGAP), yeast

Gene BEM3, Length 3,387 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BEM3	YPL115C	DIG2	Q03373	323 aa	Known RBP	0.27	□□□□□ -2.37
BEM3	YPL115C	YPR172W	Q06608	200 aa		0.27	□□□□□ -2.37
BEM3	YPL115C	YPL162C	Q12042	273 aa		0.27	□□□□□ -2.37
BEM3	YPL115C	YKL183C-A	Q3E765	70 aa		0.27	□□□□□ -2.37
BEM3	YPL115C	RPL27A	P0C2H6	136 aa	Known RBP	0.27	□□□□□ -2.37
BEM3	YPL115C	RPL27B	P0C2H7	136 aa	Known RBP	0.27	□□□□□ -2.37
BEM3	YPL115C	MRPS28	P21771	286 aa		0.27	□□□□□ -2.37
BEM3	YPL115C	NTG1	P31378	399 aa		0.27	□□□□□ -2.37
BEM3	YPL115C	MGM101	P32787	269 aa	Known RBP	0.27	□□□□□ -2.37
BEM3	YPL115C	PRX1	P34227	261 aa	Known RBP	0.27	□□□□□ -2.37
BEM3	YPL115C	EBP2	P36049	427 aa	Known RBP	0.27	□□□□□ -2.37
BEM3	YPL115C	FMC1	P40491	155 aa		0.27	□□□□□ -2.37
BEM3	YPL115C	YNR062C	P53748	327 aa		0.27	□□□□□ -2.37
BEM3	YPL115C	TVP15	Q03860	143 aa		0.27	□□□□□ -2.37
BEM3	YPL115C	COQ10	Q08058	207 aa		0.27	□□□□□ -2.37
BEM3	YPL115C	CDC8	P00572	216 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	YCR102C	P25608	368 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	DOG1	P38774	246 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	PET100	P38958	111 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	MIC19	P43594	170 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	HOP2	P53187	214 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	DAD3	P69850	94 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	NIP7	Q08962	181 aa	Known RBP	0.26	□□□□□ -2.37
BEM3	YPL115C	JIP3	O13555	125 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	MSW1	P04803	379 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	YLR156W	P0CE96	114 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	YLR159W	P0CE97	114 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	YLR161W	P0CE98	114 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	BMH1	P29311	267 aa	Known RBP	0.26	□□□□□ -2.37
BEM3	YPL115C	VMA6	P32366	345 aa	Known RBP	0.26	□□□□□ -2.37
BEM3	YPL115C	YKR045C	P36138	183 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	YHI9	P38765	294 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	SRP14	P38985	146 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	TIF34	P40217	347 aa	Known RBP	0.26	□□□□□ -2.37
BEM3	YPL115C	ARC15	P40518	154 aa	RIP-Chip data	0.26	□□□□□ -2.37	not detected
BEM3	YPL115C	CDC40	P40968	455 aa	Predicted RBP	0.26	□□□□□ -2.37
BEM3	YPL115C	CUS2	P53830	285 aa	Predicted RBP	0.26	□□□□□ -2.37
BEM3	YPL115C	SDC1	Q03323	175 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	MZM1	Q03429	123 aa	Predicted RBP	0.26	□□□□□ -2.37
BEM3	YPL115C	ATG31	Q12421	196 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	RIF1	P29539	1916 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	MEC1	P38111	2368 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	RPS5	P26783	225 aa	Known RBP	0.26	□□□□□ -2.37
BEM3	YPL115C	SSO1	P32867	290 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	KDX1	P36005	433 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.26	□□□□□ -2.37	not detected
BEM3	YPL115C	AVT2	P39981	480 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	YER135C	P40082	130 aa		0.26	□□□□□ -2.37
BEM3	YPL115C	SME1	Q12330	94 aa	Predicted RBP	0.26	□□□□□ -2.37
BEM3	YPL115C	CDC7	P06243	507 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	GCN3	P14741	305 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	CCA1	P21269	546 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	TAH1	P25638	111 aa	Predicted RBP	0.25	□□□□□ -2.37
BEM3	YPL115C	EHD3	P28817	500 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	VPS21	P36017	210 aa	Known RBP	0.25	□□□□□ -2.37
BEM3	YPL115C	DOG2	P38773	246 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	YHB1	P39676	399 aa	Known RBP	0.25	□□□□□ -2.37
BEM3	YPL115C	COG3	P40094	801 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	AGE2	P40529	298 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	ILM1	P47155	203 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	AIF1	P52923	378 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	MMS2	P53152	137 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	FYV12	Q08559	129 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	YOR186W	Q08560	144 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	YML100W-A	Q8TGT0	57 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	TOR2	P32600	2474 aa	Known RBP	0.25	□□□□□ -2.37
BEM3	YPL115C	YLR419W	Q06698	1435 aa	Known RBP	0.25	□□□□□ -2.37
BEM3	YPL115C	TIM9	O74700	87 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	RPL25	P04456	142 aa	Known RBP	0.25	□□□□□ -2.37
BEM3	YPL115C	RPL9A	P05738	191 aa	Known RBP	0.25	□□□□□ -2.37
BEM3	YPL115C	PBN1	P25580	416 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	YKT6	P36015	200 aa	Known RBP	0.25	□□□□□ -2.37
BEM3	YPL115C	YPT52	P36018	234 aa	Known RBP	0.25	□□□□□ -2.37
BEM3	YPL115C	TEM1	P38987	245 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	HOC1	P47124	396 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	RPL9B	P51401	191 aa	Known RBP	0.25	□□□□□ -2.37
BEM3	YPL115C	NOP19	P53317	196 aa	Predicted RBP	0.25	□□□□□ -2.37
BEM3	YPL115C	LPP1	Q04396	274 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	SEI1	Q06058	285 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	CYR1	P08678	2026 aa	Known RBP	0.25	□□□□□ -2.37
BEM3	YPL115C	RPS28B	P0C0X0	67 aa	Known RBP	0.25	□□□□□ -2.37
BEM3	YPL115C	RTC3	P38804	111 aa	Predicted RBP	0.25	□□□□□ -2.37
BEM3	YPL115C	SVP26	P38869	228 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	PEX17	P40155	199 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	YJR141W	P47172	347 aa	Predicted RBP	0.25	□□□□□ -2.37
BEM3	YPL115C	COS6	P53344	381 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	YMR279C	Q03263	540 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	FUS2	Q05670	677 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	SMT3	Q12306	101 aa	Known RBP	0.25	□□□□□ -2.37
BEM3	YPL115C	PEX11	Q12462	236 aa		0.25	□□□□□ -2.37
BEM3	YPL115C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.25	□□□□□ -2.37
BEM3	YPL115C	PUT1	P09368	476 aa		0.24	□□□□□ -2.37
BEM3	YPL115C	RPS24A	P0CX31	135 aa	Known RBP	0.24	□□□□□ -2.37
BEM3	YPL115C	RPS24B	P0CX32	135 aa	Known RBP	0.24	□□□□□ -2.37
BEM3	YPL115C	YBR219C	P38317	127 aa		0.24	□□□□□ -2.37
BEM3	YPL115C	URA8	P38627	578 aa	Predicted RBP	0.24	□□□□□ -2.37
BEM3	YPL115C	BMT5	P40493	336 aa		0.24	□□□□□ -2.37
BEM3	YPL115C	MRPL49	P40858	161 aa	Predicted RBP	0.24	□□□□□ -2.37
BEM3	YPL115C	YGL193C	P53097	103 aa		0.24	□□□□□ -2.37
BEM3	YPL115C	TIM11	P81449	96 aa	Predicted RBP	0.24	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms