RNA–Protein interactions for RNA: YOR316C

COT1, Transcript of Vacuolar transporter that mediates zinc transport into the vacuole, yeast

Gene COT1, Length 1,320 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
COT1	YOR316C	YPS1	P32329	569 aa		4.12	□□□□□ -1.75
COT1	YOR316C	NAT2	P37293	288 aa		4.12	□□□□□ -1.75
COT1	YOR316C	GPX2	P38143	162 aa		4.12	□□□□□ -1.75
COT1	YOR316C	YBR242W	P38331	238 aa		4.12	□□□□□ -1.75
COT1	YOR316C	ATG18	P43601	500 aa		4.12	□□□□□ -1.75
COT1	YOR316C	TAX4	P47030	604 aa		4.12	□□□□□ -1.75
COT1	YOR316C	SMM1	P53720	384 aa	Known RBP	4.12	□□□□□ -1.75
COT1	YOR316C	RNH201	P53942	307 aa		4.12	□□□□□ -1.75
COT1	YOR316C	CTF19	Q02732	369 aa		4.12	□□□□□ -1.75
COT1	YOR316C	YPL067C	Q02754	198 aa		4.12	□□□□□ -1.75
COT1	YOR316C	YMR279C	Q03263	540 aa		4.12	□□□□□ -1.75
COT1	YOR316C	VPS71	Q03433	280 aa		4.12	□□□□□ -1.75
COT1	YOR316C	MSS11	Q03825	758 aa		4.12	□□□□□ -1.75
COT1	YOR316C	SRL1	Q08673	210 aa		4.12	□□□□□ -1.75
COT1	YOR316C	MSH5	Q12175	901 aa		4.12	□□□□□ -1.75
COT1	YOR316C	YCL048W-A	Q2V2Q2	79 aa		4.12	□□□□□ -1.75
COT1	YOR316C	SUS1	Q6WNK7	96 aa		4.12	□□□□□ -1.75
COT1	YOR316C	CDC28	P00546	298 aa	Known RBP	4.11	□□□□□ -1.75
COT1	YOR316C	RPL25	P04456	142 aa	Known RBP	4.11	□□□□□ -1.75
COT1	YOR316C	ADK1	P07170	222 aa	Known RBP	4.11	□□□□□ -1.75
COT1	YOR316C	RPS18A	P0CX55	146 aa	Known RBP	4.11	□□□□□ -1.75
COT1	YOR316C	RPS18B	P0CX56	146 aa	Predicted RBP	4.11	□□□□□ -1.75
COT1	YOR316C	DPB2	P24482	689 aa	Predicted RBP	4.11	□□□□□ -1.75
COT1	YOR316C	ERG24	P32462	438 aa	Known RBP	4.11	□□□□□ -1.75
COT1	YOR316C	RAD23	P32628	398 aa	Known RBP	4.11	□□□□□ -1.75
COT1	YOR316C	ZRT3	P34240	503 aa		4.11	□□□□□ -1.75
COT1	YOR316C	QDR3	P38227	689 aa		4.11	□□□□□ -1.75
COT1	YOR316C	MBA1	P38300	278 aa		4.11	□□□□□ -1.75
COT1	YOR316C	CDC40	P40968	455 aa	Predicted RBP	4.11	□□□□□ -1.75
COT1	YOR316C	PAM16	P42949	149 aa		4.11	□□□□□ -1.75
COT1	YOR316C	GNA1	P43577	159 aa	Predicted RBP	4.11	□□□□□ -1.75
COT1	YOR316C	PHB2	P50085	310 aa		4.11	□□□□□ -1.75
COT1	YOR316C	UFD1	P53044	361 aa		4.11	□□□□□ -1.75
COT1	YOR316C	CPR8	P53728	308 aa		4.11	□□□□□ -1.75
COT1	YOR316C	NMA1	Q06178	401 aa	Known RBP	4.11	□□□□□ -1.75
COT1	YOR316C	TPO3	Q06451	622 aa		4.11	□□□□□ -1.75
COT1	YOR316C	ASR1	Q06834	288 aa		4.11	□□□□□ -1.75
COT1	YOR316C	SSK1	Q07084	712 aa		4.11	□□□□□ -1.75
COT1	YOR316C	PRP11	Q07350	266 aa	Predicted RBP	4.11	□□□□□ -1.75
COT1	YOR316C	FCY22	Q12119	530 aa		4.11	□□□□□ -1.75
COT1	YOR316C	ATP10	P18496	279 aa		4.1	□□□□□ -1.75
COT1	YOR316C	YOX1	P34161	385 aa		4.1	□□□□□ -1.75
COT1	YOR316C	YPT10	P38146	199 aa		4.1	□□□□□ -1.75
COT1	YOR316C	YHR122W	P38829	231 aa		4.1	□□□□□ -1.75
COT1	YOR316C	FLO5	P38894	1075 aa		4.1	□□□□□ -1.75
COT1	YOR316C	YND1	P40009	630 aa		4.1	□□□□□ -1.75
COT1	YOR316C	YER079W	P40052	210 aa	Known RBP	4.1	□□□□□ -1.75
COT1	YOR316C	SNX4	P47057	423 aa		4.1	□□□□□ -1.75
COT1	YOR316C	GPI14	P47088	403 aa	Known RBP	4.1	□□□□□ -1.75
COT1	YOR316C	SSN8	P47821	323 aa		4.1	□□□□□ -1.75
COT1	YOR316C	NSA1	P53136	463 aa	Predicted RBP	4.1	□□□□□ -1.75
COT1	YOR316C	MRH4	P53166	561 aa		4.1	□□□□□ -1.75
COT1	YOR316C	GEP7	P53171	287 aa		4.1	□□□□□ -1.75
COT1	YOR316C	HNT1	Q04344	158 aa	Known RBP	4.1	□□□□□ -1.75
COT1	YOR316C	YLR283W	Q05867	314 aa		4.1	□□□□□ -1.75
COT1	YOR316C	LIP2	Q06005	328 aa		4.1	□□□□□ -1.75
COT1	YOR316C	TIR4	Q12218	487 aa	Predicted RBP	4.1	□□□□□ -1.75
COT1	YOR316C	LSO2	Q3E772	92 aa	Known RBP	4.1	□□□□□ -1.75
COT1	YOR316C	CMC2	Q3E7A4	109 aa		4.1	□□□□□ -1.75
COT1	YOR316C	YNL162W-A	Q3E7A8	72 aa		4.1	□□□□□ -1.75
COT1	YOR316C	SOR1	P35497	357 aa	Known RBP	4.09	□□□□□ -1.75
COT1	YOR316C	PRS2	P38620	318 aa	Known RBP	4.09	□□□□□ -1.75
COT1	YOR316C	VMA22	P38784	181 aa		4.09	□□□□□ -1.75
COT1	YOR316C	FCY21	P40039	528 aa		4.09	□□□□□ -1.75
COT1	YOR316C	SER2	P42941	309 aa		4.09	□□□□□ -1.75
COT1	YOR316C	HAM1	P47119	197 aa	Known RBP	4.09	□□□□□ -1.75
COT1	YOR316C	YGL117W	P53133	265 aa		4.09	□□□□□ -1.75
COT1	YOR316C	UPS1	Q05776	175 aa		4.09	□□□□□ -1.75
COT1	YOR316C	HEM25	Q07534	307 aa		4.09	□□□□□ -1.75
COT1	YOR316C	SOR2	Q07786	357 aa		4.09	□□□□□ -1.75
COT1	YOR316C	GEP3	Q08622	556 aa		4.09	□□□□□ -1.75
COT1	YOR316C	YPL199C	Q08954	240 aa		4.09	□□□□□ -1.75
COT1	YOR316C	YOR283W	Q12040	230 aa	Known RBP	4.09	□□□□□ -1.75
COT1	YOR316C	BBP1	Q12365	385 aa		4.09	□□□□□ -1.75
COT1	YOR316C	PAA1	Q12447	191 aa	Known RBP	4.09	□□□□□ -1.75
COT1	YOR316C	CHO1	P08456	276 aa		4.08	□□□□□ -1.76
COT1	YOR316C	MIG1	P27705	504 aa		4.08	□□□□□ -1.76
COT1	YOR316C	YBL010C	P32788	280 aa		4.08	□□□□□ -1.76
COT1	YOR316C	YKL063C	P35725	167 aa		4.08	□□□□□ -1.76
COT1	YOR316C	RMD6	P39975	231 aa		4.08	□□□□□ -1.76
COT1	YOR316C	CCS1	P40202	249 aa	Known RBP	4.08	□□□□□ -1.76
COT1	YOR316C	MRX5	P47007	382 aa		4.08	□□□□□ -1.76
COT1	YOR316C	IRC18	P47056	224 aa		4.08	□□□□□ -1.76
COT1	YOR316C	XPT1	P47165	209 aa		4.08	□□□□□ -1.76
COT1	YOR316C	BXI1	P48558	297 aa		4.08	□□□□□ -1.76
COT1	YOR316C	VHT1	P53241	593 aa		4.08	□□□□□ -1.76
COT1	YOR316C	YNR064C	P53750	290 aa		4.08	□□□□□ -1.76
COT1	YOR316C	COA4	Q05809	96 aa		4.08	□□□□□ -1.76
COT1	YOR316C	YOR186W	Q08560	144 aa		4.08	□□□□□ -1.76
COT1	YOR316C	ATG41	Q12048	136 aa		4.08	□□□□□ -1.76
COT1	YOR316C	IES3	Q12345	250 aa		4.08	□□□□□ -1.76
COT1	YOR316C	EAF3	Q12432	401 aa		4.08	□□□□□ -1.76
COT1	YOR316C	ODC2	Q99297	307 aa		4.08	□□□□□ -1.76
COT1	YOR316C	RPL39	P04650	51 aa		4.07	□□□□□ -1.76
COT1	YOR316C	YLL053C	P0CD98	152 aa		4.07	□□□□□ -1.76
COT1	YOR316C	URA6	P15700	204 aa		4.07	□□□□□ -1.76
COT1	YOR316C	IFM1	P25038	676 aa		4.07	□□□□□ -1.76
COT1	YOR316C	GPI18	P38211	433 aa		4.07	□□□□□ -1.76
COT1	YOR316C	YJL118W	P47022	219 aa		4.07	□□□□□ -1.76
COT1	YOR316C	ERV29	P53337	310 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms