RNA–Protein interactions for RNA: YOR275C

RIM20, Transcript of Protein involved in proteolytic activation of Rim101p, yeast

Gene RIM20, Length 1,986 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM20	YOR275C	BBP1	Q12365	385 aa		0.69	□□□□□ -2.3
RIM20	YOR275C	EMC6	Q12431	108 aa		0.69	□□□□□ -2.3
RIM20	YOR275C	ISD11	Q6Q560	94 aa		0.69	□□□□□ -2.3
RIM20	YOR275C	SEC16	P48415	2195 aa	Known RBP	0.69	□□□□□ -2.3
RIM20	YOR275C	YLR422W	Q06409	1932 aa		0.69	□□□□□ -2.3
RIM20	YOR275C	RPA190	P10964	1664 aa	Known RBP	0.69	□□□□□ -2.3
RIM20	YOR275C	CYR1	P08678	2026 aa	Known RBP	0.69	□□□□□ -2.3
RIM20	YOR275C	FMP27	Q06179	2628 aa		0.69	□□□□□ -2.3
RIM20	YOR275C	DUR1,2	P32528	1835 aa	Known RBP	0.69	□□□□□ -2.3
RIM20	YOR275C	YEL009C-A	A0A023PZF2	135 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	UBC6	P33296	250 aa	Predicted RBP	0.68	□□□□□ -2.3
RIM20	YOR275C	YOR062C	P36025	268 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	MRPL39	P36533	70 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	YBR063C	P38083	404 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	EGD2	P38879	174 aa	Known RBP	0.68	□□□□□ -2.3
RIM20	YOR275C	YNL200C	P40165	246 aa	Known RBP	0.68	□□□□□ -2.3
RIM20	YOR275C	OST2	P46964	130 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	YJR056C	P47115	236 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	CGR1	P53188	120 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	YNR077C	P53758	84 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	YMR226C	Q05016	267 aa	Known RBP	0.68	□□□□□ -2.3
RIM20	YOR275C	ESC1	Q03661	1658 aa	Known RBP	0.68	□□□□□ -2.3
RIM20	YOR275C	RPL27A	P0C2H6	136 aa	Known RBP	0.68	□□□□□ -2.3
RIM20	YOR275C	RPL27B	P0C2H7	136 aa	Known RBP	0.68	□□□□□ -2.3
RIM20	YOR275C	YPR170W-B	P0C5R9	85 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	UBC8	P28263	218 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	OCH1	P31755	480 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	MRPL17	P36528	281 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	TRS20	P38334	175 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	DOG2	P38773	246 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	TRM5	P38793	499 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	SNX4	P47057	423 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	ATG39	Q06159	398 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	PST2	Q12335	198 aa	Known RBP	0.68	□□□□□ -2.3
RIM20	YOR275C	HTL1	Q9URQ5	78 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	PDR18	P53756	1333 aa		0.68	□□□□□ -2.3
RIM20	YOR275C	SIR2	P06700	562 aa		0.67	□□□□□ -2.3
RIM20	YOR275C	PUT1	P09368	476 aa		0.67	□□□□□ -2.3
RIM20	YOR275C	RPB3	P16370	318 aa	Known RBP	0.67	□□□□□ -2.3
RIM20	YOR275C	FCY2	P17064	533 aa		0.67	□□□□□ -2.3
RIM20	YOR275C	YCR023C	P25351	611 aa		0.67	□□□□□ -2.3
RIM20	YOR275C	MEI4	P29467	408 aa		0.67	□□□□□ -2.3
RIM20	YOR275C	ACP1	P32463	125 aa		0.67	□□□□□ -2.3
RIM20	YOR275C	OPY1	P38271	328 aa		0.67	□□□□□ -2.3
RIM20	YOR275C	VTC1	P40046	129 aa	RIP-Chip data	0.67	□□□□□ -2.3	not detected
RIM20	YOR275C	YJL016W	P47072	561 aa		0.67	□□□□□ -2.3
RIM20	YOR275C	DOC1	P53068	250 aa		0.67	□□□□□ -2.3
RIM20	YOR275C	BOL2	P53082	120 aa		0.67	□□□□□ -2.3
RIM20	YOR275C	ARO8	P53090	500 aa	Known RBP	0.67	□□□□□ -2.3
RIM20	YOR275C	YOL024W	Q08172	172 aa		0.67	□□□□□ -2.3
RIM20	YOR275C	FYV12	Q08559	129 aa		0.67	□□□□□ -2.3
RIM20	YOR275C	AKR2	Q12013	749 aa		0.67	□□□□□ -2.3
RIM20	YOR275C	GEA2	P39993	1459 aa	Known RBP	0.67	□□□□□ -2.3
RIM20	YOR275C	SNF2	P22082	1703 aa		0.67	□□□□□ -2.3
RIM20	YOR275C	CPA1	P07258	411 aa	Known RBP	0.66	□□□□□ -2.3
RIM20	YOR275C	RPS24A	P0CX31	135 aa	Known RBP	0.66	□□□□□ -2.3
RIM20	YOR275C	RPS24B	P0CX32	135 aa	Known RBP	0.66	□□□□□ -2.3
RIM20	YOR275C	CCA1	P21269	546 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	MGT1	P26188	188 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	YKR045C	P36138	183 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	POP4	P38336	279 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	SLM6	P38343	150 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	SSH1	P38353	490 aa	Known RBP	0.66	□□□□□ -2.3
RIM20	YOR275C	COS8	P38723	381 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	FYV4	P38783	130 aa	Predicted RBP	0.66	□□□□□ -2.3
RIM20	YOR275C	NVJ1	P38881	321 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	SEC72	P39742	193 aa	Known RBP	0.66	□□□□□ -2.3
RIM20	YOR275C	ARC15	P40518	154 aa	RIP-Chip data	0.66	□□□□□ -2.3	not detected
RIM20	YOR275C	YFL019C	P43576	117 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	SKI6	P46948	246 aa	Predicted RBP	0.66	□□□□□ -2.3
RIM20	YOR275C	YNR062C	P53748	327 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	YDC1	Q02896	317 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	YPL257W	Q08974	193 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	PST1	Q12355	444 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	SAS5	Q99314	248 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	DNF2	Q12675	1612 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	MBF1	O14467	151 aa	Known RBP	0.66	□□□□□ -2.3
RIM20	YOR275C	TIM9	O74700	87 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	CDC8	P00572	216 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	PHO85	P17157	305 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	TAH1	P25638	111 aa	Predicted RBP	0.66	□□□□□ -2.3
RIM20	YOR275C	SCM4	P32564	187 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	ABF2	Q02486	183 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	RNH202	Q05635	350 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	YOR020W-A	Q3E824	90 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	IGO2	Q9P305	131 aa		0.66	□□□□□ -2.3
RIM20	YOR275C	FBA1	P14540	359 aa	Known RBP	0.65	□□□□□ -2.31
RIM20	YOR275C	SCL1	P21243	252 aa	Known RBP	0.65	□□□□□ -2.31
RIM20	YOR275C	MRPS28	P21771	286 aa		0.65	□□□□□ -2.31
RIM20	YOR275C	MAG1	P22134	296 aa	Known RBP	0.65	□□□□□ -2.31
RIM20	YOR275C	FES1	P38260	290 aa		0.65	□□□□□ -2.31
RIM20	YOR275C	HMF1	P40037	129 aa	Known RBP	0.65	□□□□□ -2.31
RIM20	YOR275C	FIS1	P40515	155 aa		0.65	□□□□□ -2.31
RIM20	YOR275C	AIF1	P52923	378 aa		0.65	□□□□□ -2.31
RIM20	YOR275C	ORM1	P53224	222 aa		0.65	□□□□□ -2.31
RIM20	YOR275C	PGA1	P53896	198 aa		0.65	□□□□□ -2.31
RIM20	YOR275C	YDR274C	P87283	123 aa		0.65	□□□□□ -2.31
RIM20	YOR275C	MRPS8	Q03799	155 aa		0.65	□□□□□ -2.31
RIM20	YOR275C	GPI17	Q04080	534 aa		0.65	□□□□□ -2.31
RIM20	YOR275C	NEJ1	Q06148	342 aa		0.65	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms