RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS5	YOR069W	NCE101	Q02820	53 aa		5.19	□□□□□ -1.58
VPS5	YOR069W	UPS3	Q04006	179 aa		5.19	□□□□□ -1.58
VPS5	YOR069W	YLR179C	Q06252	201 aa	Known RBP	5.19	□□□□□ -1.58
VPS5	YOR069W	ENB1	Q08299	606 aa		5.19	□□□□□ -1.58
VPS5	YOR069W	LEU9	Q12166	604 aa	Known RBP	5.19	□□□□□ -1.58
VPS5	YOR069W	TPT1	Q12272	230 aa	Known RBP	5.19	□□□□□ -1.58
VPS5	YOR069W	YDR157W	A0A023PZE8	133 aa		5.19	□□□□□ -1.58
VPS5	YOR069W	MSW1	P04803	379 aa		5.19	□□□□□ -1.58
VPS5	YOR069W	UTR5	P32630	166 aa		5.19	□□□□□ -1.58
VPS5	YOR069W	YHR180W	P38868	163 aa		5.19	□□□□□ -1.58
VPS5	YOR069W	THG1	P53215	237 aa	Known RBP	5.19	□□□□□ -1.58
VPS5	YOR069W	AQR1	P53943	586 aa		5.19	□□□□□ -1.58
VPS5	YOR069W	YOL024W	Q08172	172 aa		5.19	□□□□□ -1.58
VPS5	YOR069W	YPR071W	Q12346	211 aa		5.19	□□□□□ -1.58
VPS5	YOR069W	YOR343C	Q12484	108 aa		5.19	□□□□□ -1.58
VPS5	YOR069W	GAL7	P08431	366 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	SPT15	P13393	240 aa	Known RBP	5.18	□□□□□ -1.58
VPS5	YOR069W	VMA3	P25515	160 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	CWP1	P28319	239 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	SUA7	P29055	345 aa	Predicted RBP	5.18	□□□□□ -1.58
VPS5	YOR069W	REC114	P32841	428 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	YKL102C	P34249	101 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	SHB17	P36136	271 aa	Known RBP	5.18	□□□□□ -1.58
VPS5	YOR069W	POP2	P39008	433 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	PAC2	P39937	518 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	SNO3	P43544	222 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	SNO2	P53823	222 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	YPL039W	Q03080	316 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	DAL4	Q04895	635 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	NAT3	Q06504	195 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	MIM1	Q08176	113 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	YDL157C	Q12082	118 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	MCP1	Q12106	302 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	YPR170W-B	P0C5R9	85 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	ERV1	P27882	189 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	AFG1	P32317	509 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	YKL187C	P34231	750 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	PAU16	P35994	123 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	AME1	P38313	324 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	RPF1	P38805	295 aa	Known RBP	5.18	□□□□□ -1.58
VPS5	YOR069W	LOC1	P43586	204 aa	Predicted RBP	5.18	□□□□□ -1.58
VPS5	YOR069W	YFR054C	P43622	192 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	PDR17	P53844	350 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	COQ11	Q05892	277 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	CTS2	Q06350	511 aa		5.18	□□□□□ -1.58
VPS5	YOR069W	DDI2	P0CH63	225 aa		5.17	□□□□□ -1.58
VPS5	YOR069W	DDI3	P0CH64	225 aa		5.17	□□□□□ -1.58
VPS5	YOR069W	PEX4	P29340	183 aa		5.17	□□□□□ -1.58
VPS5	YOR069W	FMP46	P36141	133 aa	Known RBP	5.17	□□□□□ -1.58
VPS5	YOR069W	YER134C	P40081	178 aa		5.17	□□□□□ -1.58
VPS5	YOR069W	MIC26	P50087	233 aa		5.17	□□□□□ -1.58
VPS5	YOR069W	DUG3	P53871	357 aa		5.17	□□□□□ -1.58
VPS5	YOR069W	RPL21A	Q02753	160 aa	Known RBP	5.17	□□□□□ -1.58
VPS5	YOR069W	YPL077C	Q02831	240 aa		5.17	□□□□□ -1.58
VPS5	YOR069W	TSA2	Q04120	196 aa		5.17	□□□□□ -1.58
VPS5	YOR069W	RFU1	Q08003	200 aa		5.17	□□□□□ -1.58
VPS5	YOR069W	MCH4	Q08268	501 aa		5.17	□□□□□ -1.58
VPS5	YOR069W	RPL21B	Q12672	160 aa	Known RBP	5.17	□□□□□ -1.58
VPS5	YOR069W	YLR365W	Q7LIF2	110 aa		5.17	□□□□□ -1.58
VPS5	YOR069W	SPS18	P32572	300 aa		5.16	□□□□□ -1.58
VPS5	YOR069W	PMU1	P36069	295 aa		5.16	□□□□□ -1.58
VPS5	YOR069W	BDH1	P39714	382 aa		5.16	□□□□□ -1.58
VPS5	YOR069W	IZH1	Q03419	316 aa		5.16	□□□□□ -1.58
VPS5	YOR069W	MSC3	Q05812	728 aa		5.16	□□□□□ -1.58
VPS5	YOR069W	HRI1	Q05905	244 aa	Known RBP	5.16	□□□□□ -1.58
VPS5	YOR069W	YPL257W	Q08974	193 aa		5.16	□□□□□ -1.58
VPS5	YOR069W	YPL264C	Q08980	353 aa		5.16	□□□□□ -1.58
VPS5	YOR069W	DAT1	P13483	248 aa	Known RBP	5.16	□□□□□ -1.58
VPS5	YOR069W	PRY2	P36110	329 aa		5.16	□□□□□ -1.58
VPS5	YOR069W	ELO1	P39540	310 aa		5.16	□□□□□ -1.58
VPS5	YOR069W	ZIM17	P42844	174 aa		5.16	□□□□□ -1.58
VPS5	YOR069W	TRM9	P49957	279 aa		5.16	□□□□□ -1.58
VPS5	YOR069W	HSV2	P50079	448 aa	Predicted RBP	5.16	□□□□□ -1.58
VPS5	YOR069W	TUB4	P53378	473 aa		5.16	□□□□□ -1.58
VPS5	YOR069W	CGI121	Q03705	181 aa	Known RBP	5.16	□□□□□ -1.58
VPS5	YOR069W	HUG1	Q6Q5K6	68 aa		5.16	□□□□□ -1.58
VPS5	YOR069W	SAL1	D6W196	494 aa		5.15	□□□□□ -1.58
VPS5	YOR069W	ADE8	P04161	214 aa		5.15	□□□□□ -1.58
VPS5	YOR069W	RPS22A	P0C0W1	130 aa	Known RBP	5.15	□□□□□ -1.58
VPS5	YOR069W	QCR9	P22289	66 aa		5.15	□□□□□ -1.58
VPS5	YOR069W	PCL1	P24867	279 aa		5.15	□□□□□ -1.58
VPS5	YOR069W	OCH1	P31755	480 aa		5.15	□□□□□ -1.58
VPS5	YOR069W	SOF1	P33750	489 aa	Known RBP	5.15	□□□□□ -1.58
VPS5	YOR069W	WSC4	P38739	605 aa		5.15	□□□□□ -1.58
VPS5	YOR069W	PRE5	P40302	234 aa	Known RBP	5.15	□□□□□ -1.58
VPS5	YOR069W	YJL028W	P47062	111 aa		5.15	□□□□□ -1.58
VPS5	YOR069W	YNL165W	P53891	406 aa		5.15	□□□□□ -1.58
VPS5	YOR069W	DIG2	Q03373	323 aa	Known RBP	5.15	□□□□□ -1.58
VPS5	YOR069W	YMR166C	Q03829	368 aa		5.15	□□□□□ -1.58
VPS5	YOR069W	HED1	Q03937	162 aa		5.15	□□□□□ -1.58
VPS5	YOR069W	YDR444W	Q04093	687 aa		5.15	□□□□□ -1.58
VPS5	YOR069W	GIM5	Q04493	163 aa		5.15	□□□□□ -1.58
VPS5	YOR069W	TRI1	Q05024	226 aa		5.15	□□□□□ -1.58
VPS5	YOR069W	PAM18	Q07914	168 aa		5.15	□□□□□ -1.58
VPS5	YOR069W	FRE8	Q12209	686 aa		5.15	□□□□□ -1.58
VPS5	YOR069W	ERS1	P17261	260 aa		5.14	□□□□□ -1.59
VPS5	YOR069W	SCO1	P23833	295 aa		5.14	□□□□□ -1.59
VPS5	YOR069W	GSP1	P32835	219 aa	Known RBP	5.14	□□□□□ -1.59
VPS5	YOR069W	GSP2	P32836	220 aa	Known RBP	5.14	□□□□□ -1.59
VPS5	YOR069W	QDR3	P38227	689 aa		5.14	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms