RNA–Protein interactions for RNA: YNL162W

RPL42A, Transcript of Ribosomal 60S subunit protein L42A, yeast

Gene RPL42A, Length 321 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL42A	YNL162W	BNA7	Q04066	261 aa		0.96	□□□□□ -2.26
RPL42A	YNL162W	YCL012C	Q8J0M4	134 aa		0.96	□□□□□ -2.26
RPL42A	YNL162W	YFR032C-B	Q8TGU2	87 aa		0.96	□□□□□ -2.26
RPL42A	YNL162W	CYR1	P08678	2026 aa	Known RBP	0.95	□□□□□ -2.26
RPL42A	YNL162W	RPL27A	P0C2H6	136 aa	Known RBP	0.95	□□□□□ -2.26
RPL42A	YNL162W	MER1	P16523	270 aa		0.95	□□□□□ -2.26
RPL42A	YNL162W	CNB1	P25296	175 aa		0.95	□□□□□ -2.26
RPL42A	YNL162W	NTG1	P31378	399 aa		0.95	□□□□□ -2.26
RPL42A	YNL162W	KDX1	P36005	433 aa		0.95	□□□□□ -2.26
RPL42A	YNL162W	YKT6	P36015	200 aa	Known RBP	0.95	□□□□□ -2.26
RPL42A	YNL162W	YKR045C	P36138	183 aa		0.95	□□□□□ -2.26
RPL42A	YNL162W	VMA22	P38784	181 aa		0.95	□□□□□ -2.26
RPL42A	YNL162W	TRM5	P38793	499 aa		0.95	□□□□□ -2.26
RPL42A	YNL162W	AST2	P39945	430 aa	Known RBP	0.95	□□□□□ -2.26
RPL42A	YNL162W	RMD6	P39975	231 aa		0.95	□□□□□ -2.26
RPL42A	YNL162W	YER034W	P40022	185 aa	Known RBP	0.95	□□□□□ -2.26
RPL42A	YNL162W	KNH1	P50112	268 aa		0.95	□□□□□ -2.26
RPL42A	YNL162W	RIO1	Q12196	484 aa	Known RBP	0.95	□□□□□ -2.26
RPL42A	YNL162W	GIS3	Q12418	502 aa		0.95	□□□□□ -2.26
RPL42A	YNL162W	ODC2	Q99297	307 aa		0.95	□□□□□ -2.26
RPL42A	YNL162W	YLR236C	A0A023PZG4	107 aa		0.94	□□□□□ -2.26
RPL42A	YNL162W	RPL25	P04456	142 aa	Known RBP	0.94	□□□□□ -2.26
RPL42A	YNL162W	GPA2	P10823	449 aa		0.94	□□□□□ -2.26
RPL42A	YNL162W	FPR1	P20081	114 aa	Known RBP	0.94	□□□□□ -2.26
RPL42A	YNL162W	OCH1	P31755	480 aa		0.94	□□□□□ -2.26
RPL42A	YNL162W	ASF2	P32448	525 aa	Predicted RBP	0.94	□□□□□ -2.26
RPL42A	YNL162W	PTM1	P32857	523 aa		0.94	□□□□□ -2.26
RPL42A	YNL162W	HMF1	P40037	129 aa	Known RBP	0.94	□□□□□ -2.26
RPL42A	YNL162W	SKI6	P46948	246 aa	Predicted RBP	0.94	□□□□□ -2.26
RPL42A	YNL162W	NUP49	Q02199	472 aa		0.94	□□□□□ -2.26
RPL42A	YNL162W	GRX3	Q03835	250 aa		0.94	□□□□□ -2.26
RPL42A	YNL162W	YMR226C	Q05016	267 aa	Known RBP	0.94	□□□□□ -2.26
RPL42A	YNL162W	ABP140	Q08641	628 aa	Known RBP	0.94	□□□□□ -2.26
RPL42A	YNL162W	ADF1	Q2V2Q1	113 aa		0.94	□□□□□ -2.26
RPL42A	YNL162W	YHR214C-E	Q8TGK0	99 aa		0.94	□□□□□ -2.26
RPL42A	YNL162W	FLO9	P39712	1322 aa		0.93	□□□□□ -2.26
RPL42A	YNL162W	IKI3	Q06706	1349 aa	Known RBP	0.93	□□□□□ -2.26
RPL42A	YNL162W	QCR7	P00128	127 aa		0.93	□□□□□ -2.26
RPL42A	YNL162W	CDC36	P06100	191 aa	Predicted RBP	0.93	□□□□□ -2.26
RPL42A	YNL162W	SEC11	P15367	167 aa		0.93	□□□□□ -2.26
RPL42A	YNL162W	PHO85	P17157	305 aa		0.93	□□□□□ -2.26
RPL42A	YNL162W	SPS18	P32572	300 aa		0.93	□□□□□ -2.26
RPL42A	YNL162W	FMP23	P38231	175 aa		0.93	□□□□□ -2.26
RPL42A	YNL162W	OPY1	P38271	328 aa		0.93	□□□□□ -2.26
RPL42A	YNL162W	ERJ5	P43613	295 aa	Predicted RBP	0.93	□□□□□ -2.26
RPL42A	YNL162W	MPC3	P53311	146 aa		0.93	□□□□□ -2.26
RPL42A	YNL162W	SAY1	P53324	424 aa		0.93	□□□□□ -2.26
RPL42A	YNL162W	MRPS17	Q03246	237 aa	Predicted RBP	0.93	□□□□□ -2.26
RPL42A	YNL162W	CWC21	Q03375	135 aa	Known RBP	0.93	□□□□□ -2.26
RPL42A	YNL162W	HNT1	Q04344	158 aa	Known RBP	0.93	□□□□□ -2.26
RPL42A	YNL162W	HTB1	P02293	131 aa	Known RBP	0.92	□□□□□ -2.26
RPL42A	YNL162W	HTB2	P02294	131 aa		0.92	□□□□□ -2.26
RPL42A	YNL162W	CPA1	P07258	411 aa	Known RBP	0.92	□□□□□ -2.26
RPL42A	YNL162W	YER076C	P40049	302 aa		0.92	□□□□□ -2.26
RPL42A	YNL162W	RFC4	P40339	323 aa	Known RBP	0.92	□□□□□ -2.26
RPL42A	YNL162W	MPA43	P53583	542 aa	Predicted RBP	0.92	□□□□□ -2.26
RPL42A	YNL162W	YDR274C	P87283	123 aa		0.92	□□□□□ -2.26
RPL42A	YNL162W	CUE4	Q04201	117 aa	Predicted RBP	0.92	□□□□□ -2.26
RPL42A	YNL162W	MDM32	Q12171	622 aa		0.92	□□□□□ -2.26
RPL42A	YNL162W	YDL180W	Q12301	547 aa		0.92	□□□□□ -2.26
RPL42A	YNL162W	MET5	P47169	1442 aa		0.91	□□□□□ -2.26
RPL42A	YNL162W	MRS1	P07266	363 aa		0.91	□□□□□ -2.26
RPL42A	YNL162W	CKS1	P20486	150 aa	Known RBP	0.91	□□□□□ -2.26
RPL42A	YNL162W	SPO13	P23624	291 aa		0.91	□□□□□ -2.26
RPL42A	YNL162W	TVP38	P36164	337 aa		0.91	□□□□□ -2.26
RPL42A	YNL162W	FLX1	P40464	311 aa		0.91	□□□□□ -2.26
RPL42A	YNL162W	ARP3	P47117	449 aa	Known RBP	0.91	□□□□□ -2.26
RPL42A	YNL162W	YAE1	P47118	141 aa	Predicted RBP	0.91	□□□□□ -2.26
RPL42A	YNL162W	EAF6	P47128	113 aa		0.91	□□□□□ -2.26
RPL42A	YNL162W	GET1	P53192	235 aa		0.91	□□□□□ -2.26
RPL42A	YNL162W	NOP19	P53317	196 aa	Predicted RBP	0.91	□□□□□ -2.26
RPL42A	YNL162W	UBC7	Q02159	165 aa		0.91	□□□□□ -2.26
RPL42A	YNL162W	YMR315W	Q04869	349 aa	Known RBP	0.91	□□□□□ -2.26
RPL42A	YNL162W	DYN3	Q04949	312 aa		0.91	□□□□□ -2.26
RPL42A	YNL162W	YOL160W	Q08321	113 aa		0.91	□□□□□ -2.26
RPL42A	YNL162W	GET4	Q12125	312 aa		0.91	□□□□□ -2.26
RPL42A	YNL162W	POR1	P04840	283 aa	Known RBP	0.9	□□□□□ -2.27
RPL42A	YNL162W	YCR090C	P25654	182 aa	Known RBP	0.9	□□□□□ -2.27
RPL42A	YNL162W	YHL042W	P38729	150 aa		0.9	□□□□□ -2.27
RPL42A	YNL162W	YEA4	P40004	342 aa		0.9	□□□□□ -2.27
RPL42A	YNL162W	SER2	P42941	309 aa		0.9	□□□□□ -2.27
RPL42A	YNL162W	AIM25	P47140	327 aa		0.9	□□□□□ -2.27
RPL42A	YNL162W	UBC12	P52491	188 aa		0.9	□□□□□ -2.27
RPL42A	YNL162W	YNL247W	P53852	767 aa	Known RBP	0.9	□□□□□ -2.27
RPL42A	YNL162W	YNL184C	P53876	108 aa		0.9	□□□□□ -2.27
RPL42A	YNL162W	ARO80	Q04052	950 aa		0.9	□□□□□ -2.27
RPL42A	YNL162W	DGA1	Q08650	418 aa		0.9	□□□□□ -2.27
RPL42A	YNL162W	UBR2	Q07963	1872 aa		0.9	□□□□□ -2.27
RPL42A	YNL162W	FAS1	P07149	2051 aa	Known RBP	0.89	□□□□□ -2.27
RPL42A	YNL162W	YAR023C	D6VPM8	179 aa		0.89	□□□□□ -2.27
RPL42A	YNL162W	MBF1	O14467	151 aa	Known RBP	0.89	□□□□□ -2.27
RPL42A	YNL162W	MATALPHA2	P0CY08	210 aa		0.89	□□□□□ -2.27
RPL42A	YNL162W	HMLALPHA2	P0CY09	210 aa		0.89	□□□□□ -2.27
RPL42A	YNL162W	ADE1	P27616	306 aa		0.89	□□□□□ -2.27
RPL42A	YNL162W	PAN3	P36102	679 aa	Predicted RBP	0.89	□□□□□ -2.27
RPL42A	YNL162W	YER134C	P40081	178 aa		0.89	□□□□□ -2.27
RPL42A	YNL162W	YFL065C	P43539	102 aa		0.89	□□□□□ -2.27
RPL42A	YNL162W	TDA4	P47153	279 aa		0.89	□□□□□ -2.27
RPL42A	YNL162W	MMS2	P53152	137 aa		0.89	□□□□□ -2.27
RPL42A	YNL162W	CGR1	P53188	120 aa		0.89	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms